RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 TTC7BQ86TV6 843 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 MAB21L3Q8N8X9 362 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 DCBLD1Q8N8Z6 715 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 CD101Q93033 1021 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 NXNL1Q96CM4 212 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 SLC25A23Q9BV35 468 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 MGAT4DA6NG13 374 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 BIRC5O15392 142 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 COX4I1P13073 169 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 LRPAP1P30533 357 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 CRHR1P34998 444 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 MSLNQ13421 630 aaPredicted RBP13.3□□□□□ -0.28
NPHP4-203ENST00000378169 FAM187BQ17R55 369 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 FSTL4Q6MZW2 842 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 FUT10Q6P4F1 479 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 C16orf87Q6PH81 154 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 HORMAD1Q86X24 394 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 OR4K2Q8NGD2 314 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 MRPL57Q9BQC6 102 aaKnown RBP13.3□□□□□ -0.28
NPHP4-203ENST00000378169 C16orf70Q9BSU1 422 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 HAPLN2Q9GZV7 340 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 ZNF358Q9NW07 568 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 FBXW11Q9UKB1 542 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 MYH1P12882 1939 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 TBC1D4O60343 1298 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 PARNO95453 639 aaKnown RBP13.3□□□□□ -0.28
NPHP4-203ENST00000378169 SELPP16109 830 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 PTDSS1P48651 473 aaKnown RBP13.3□□□□□ -0.28
NPHP4-203ENST00000378169 MTA1Q13330 715 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 OLIG2Q13516 323 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 ZNF460Q14592 562 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 CRY1Q16526 586 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 CCDC142Q17RM4 750 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 LRRC23Q53EV4 343 aaPredicted RBP13.3□□□□□ -0.28
NPHP4-203ENST00000378169 WLSQ5T9L3 541 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 SLC30A9Q6PML9 568 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 B3GNT9Q6UX72 402 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 DHFR2Q86XF0 187 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 PSMG2Q969U7 264 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 RCN3Q96D15 328 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 SCLYQ96I15 445 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 CAPNS2Q96L46 248 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 SH3BP4Q9P0V3 963 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 CLCA2Q9UQC9 943 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 PCDHGC4Q9Y5F7 938 aa13.3□□□□□ -0.28
NPHP4-203ENST00000378169 AKAP11Q9UKA4 1901 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 NRP1O14786 923 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 CD3EAPO15446 510 aaKnown RBP13.29□□□□□ -0.28
NPHP4-203ENST00000378169 LPOP22079 712 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-203ENST00000378169 FGFR3P22607 806 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 CDC16Q13042 620 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 FRG1Q14331 258 aaKnown RBP13.29□□□□□ -0.28
NPHP4-203ENST00000378169 FAM45BPQ6NSW5 357 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 OSTM1Q86WC4 334 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 OR4L1Q8NH43 312 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 FAM45AQ8TCE6 357 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 FIG4Q92562 907 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 SLCO2A1Q92959 643 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 CLPTM1LQ96KA5 538 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 CEP19Q96LK0 163 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 TBCDQ9BTW9 1192 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 GBA3Q9H227 469 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 OPTCQ9UBM4 332 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 C4BP0C0L5 1744 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 CA12O43570 354 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 WASHC5Q12768 1159 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 CAMK2GQ13555 558 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-203ENST00000378169 PRSS55Q6UWB4 352 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-203ENST00000378169 IFNL1Q8IU54 200 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 FAM120BQ96EK7 910 aaKnown RBP13.29□□□□□ -0.28
NPHP4-203ENST00000378169 FAXDC2Q96IV6 333 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 PEBP4Q96S96 227 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 KCTD14Q9BQ13 255 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-203ENST00000378169 LRCH1Q9Y2L9 728 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 HBS1LQ9Y450 684 aaKnown RBP13.29□□□□□ -0.28
NPHP4-203ENST00000378169 CXorf49A8MYA2 514 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-203ENST00000378169 FKTNO75072 461 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 SERPINA6P08185 405 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 HGFP14210 728 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 HOXB8P17481 243 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-203ENST00000378169 RAP1GDS1P52306 607 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 PFKPQ01813 784 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 TRAF2Q12933 501 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 GRB14Q14449 540 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 ACOX1Q15067 660 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 GSTCDQ8NEC7 633 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 VPS45Q9NRW7 570 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 GTF2IRD1Q9UHL9 959 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 ZNHIT2Q9UHR6 403 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 MFHAS1Q9Y4C4 1052 aa13.29□□□□□ -0.28
NPHP4-203ENST00000378169 CCDC154A6NI56 674 aa13.28□□□□□ -0.28
NPHP4-203ENST00000378169 KCNU1A8MYU2 1149 aa13.28□□□□□ -0.28
NPHP4-203ENST00000378169 FGF1P05230 155 aa13.28□□□□□ -0.28
NPHP4-203ENST00000378169 ABCB1P08183 1280 aaPredicted RBP13.28□□□□□ -0.28
NPHP4-203ENST00000378169 CORO1AP31146 461 aaKnown RBP13.28□□□□□ -0.28
NPHP4-203ENST00000378169 CACNA2D1P54289 1103 aa13.28□□□□□ -0.28
NPHP4-203ENST00000378169 NRF1Q16656 503 aa13.28□□□□□ -0.28
NPHP4-203ENST00000378169 TAPT1Q6NXT6 567 aa13.28□□□□□ -0.28
NPHP4-203ENST00000378169 FAM151BQ6UXP7 276 aa13.28□□□□□ -0.28
NPHP4-203ENST00000378169 ZNF467Q7Z7K2 595 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms