RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 PSTKQ8IV42 348 aaKnown RBP16.01■□□□□ 0.15
CKAP4-201ENST00000378026 CMTR2Q8IYT2 770 aaKnown RBP16.01■□□□□ 0.15
CKAP4-201ENST00000378026 CASP10Q92851 521 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 FTHL17Q9BXU8 183 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 NCKIPSDQ9NZQ3 722 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 USP21Q9UK80 565 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 ANKRD31Q8N7Z5 1873 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 ANKRD12Q6UB98 2062 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 HACD1B0YJ81 288 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 ZNF701M0R085 212 aaPredicted RBP16■□□□□ 0.15
CKAP4-201ENST00000378026 ACKR2O00590 384 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 SULT1C4O75897 302 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 OXSR1O95747 527 aaPredicted RBP16■□□□□ 0.15
CKAP4-201ENST00000378026 AHSGP02765 367 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 HSPA1AP0DMV8 641 aaKnown RBP16■□□□□ 0.15
CKAP4-201ENST00000378026 HSPA1BP0DMV9 641 aaKnown RBP16■□□□□ 0.15
CKAP4-201ENST00000378026 NFKBIAP25963 317 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 ELK4P28324 431 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 IGBP1P78318 339 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 SPIDRQ14159 915 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 TMEM132BQ14DG7 1078 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 SLC36A3Q495N2 470 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 ABRAXAS1Q6UWZ7 409 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 ZC3HC1Q86WB0 502 aaKnown RBP16■□□□□ 0.15
CKAP4-201ENST00000378026 CYP3A43Q9HB55 503 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 PTPRHQ9HD43 1115 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 GIMAP2Q9UG22 337 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 FAM32AQ9Y421 112 aaKnown RBP16■□□□□ 0.15
CKAP4-201ENST00000378026 MGAMO43451 1857 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 KRBA1A5PL33 1030 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 NR5A2O00482 541 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 KDM1AO60341 852 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 PGK1P00558 417 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 MTHFD1P11586 935 aaKnown RBP16■□□□□ 0.15
CKAP4-201ENST00000378026 CHRM3P20309 590 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 IL10P22301 178 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 FASP25445 335 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 KIF19Q2TAC6 998 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 C6orf183Q5T699 404 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 PELI3Q8N2H9 469 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 ZNF280CQ8ND82 737 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 RNF139Q8WU17 664 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 UHRF1Q96T88 793 aaPredicted RBP16■□□□□ 0.15
CKAP4-201ENST00000378026 MPHOSPH6Q99547 160 aaKnown RBP16■□□□□ 0.15
CKAP4-201ENST00000378026 MAF1Q9H063 256 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 DPEP3Q9H4B8 488 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 SPON1Q9HCB6 807 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 TMEM181Q9P2C4 612 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 PTBP2Q9UKA9 531 aaKnown RBP16■□□□□ 0.15
CKAP4-201ENST00000378026 ERGIC3Q9Y282 383 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 SLC27A5Q9Y2P5 690 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 SOBPA7XYQ1 873 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 BAIAP3O94812 1187 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 SNAP29O95721 258 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 IREB2P48200 963 aaKnown RBP16■□□□□ 0.15
CKAP4-201ENST00000378026 SULT1E1P49888 294 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 MAPRE2Q15555 327 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 NLGN1Q8N2Q7 840 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 DHRSXQ8N5I4 330 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 OR6B3Q8NGW1 331 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 ZNF420Q8TAQ5 688 aaPredicted RBP16■□□□□ 0.15
CKAP4-201ENST00000378026 SLC7A14Q8TBB6 771 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 SLC35F5Q8WV83 523 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 SPATA7Q9P0W8 599 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 USP3Q9Y6I4 520 aa16■□□□□ 0.15
CKAP4-201ENST00000378026 IL18RAPO95256 599 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 KCNA5P22460 613 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 GNL1P36915 607 aaPredicted RBP15.99■□□□□ 0.15
CKAP4-201ENST00000378026 CSHL1Q14406 222 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 SQLEQ14534 574 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 LY6KQ17RY6 165 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 OTUD3Q5T2D3 398 aaPredicted RBP15.99■□□□□ 0.15
CKAP4-201ENST00000378026 TMEM214Q6NUQ4 689 aaKnown RBP15.99■□□□□ 0.15
CKAP4-201ENST00000378026 KDELC2Q7Z4H8 507 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 TMEM110Q86TL2 294 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 RDH11Q8TC12 318 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 HPS1Q92902 700 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 TOP1MTQ969P6 601 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 GPR22Q99680 433 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 CCDC68Q9H2F9 335 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 PIF1Q9H611 641 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 GNPTGQ9UJJ9 305 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 GPC6Q9Y625 555 aaPredicted RBP15.99■□□□□ 0.15
CKAP4-201ENST00000378026 COL2A1P02458 1487 aaPredicted RBP15.99■□□□□ 0.15
CKAP4-201ENST00000378026 NME4O00746 187 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 TOR1BO14657 336 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 INPP4BO15327 924 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 ESRRBO95718 433 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 AP2A1O95782 977 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 JAK1P23458 1154 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 PTPN3P26045 913 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 HMGCS2P54868 508 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 TMEM132DQ14C87 1099 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 PIWIL3Q7Z3Z3 882 aaKnown RBP15.99■□□□□ 0.15
CKAP4-201ENST00000378026 RETREG3Q86VR2 466 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 DDIASQ8IXT1 998 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 USP33Q8TEY7 942 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 HDAC10Q969S8 669 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 ELMO2Q96JJ3 720 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 PCDH12Q9NPG4 1184 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms