RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	RABGEF1	Q9UJ41	708 aa		11.82	□□□□□ -0.52
LMO7-204	ENST00000377499	AGO1	Q9UL18	857 aa	Known RBP	11.82	□□□□□ -0.52
LMO7-204	ENST00000377499	TEX264	Q9Y6I9	313 aa		11.82	□□□□□ -0.52
LMO7-204	ENST00000377499	SHROOM3	Q8TF72	1996 aa		11.82	□□□□□ -0.52
LMO7-204	ENST00000377499		A0A0D9SEW6	157 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	POLB	P06746	335 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	ZDHHC11B	P0C7U3	371 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	CD86	P42081	329 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	MMP13	P45452	471 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	RXRG	P48443	463 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	PTDSS1	P48651	473 aa	Known RBP	11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	NCALD	P61601	193 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	STXBP5	Q5T5C0	1151 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	UNC5A	Q6ZN44	842 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	NEK10	Q6ZWH5	1172 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	LRRC6	Q86X45	466 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	OVCA2	Q8WZ82	227 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	EURL	Q9NYK6	297 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	STK39	Q9UEW8	545 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	CARD8	Q9Y2G2	431 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	TRAV19	A0A0A6YYK7	116 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	IQANK1	A0A1B0GTG1	560 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	LINC01553	A4QN01	128 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	GOLGA8T	H3BQL2	631 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	GRM6	O15303	877 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	FAM155B	O75949	473 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	KLKB1	P03952	638 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	HLA-DQB2	P05538	268 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	CD68	P34810	354 aa	Predicted RBP	11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	IRS1	P35568	1242 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	HTRA4	P83105	476 aa	Predicted RBP	11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	RALGDS	Q12967	914 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	C9orf50	Q5SZB4	431 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	ADGRF1	Q5T601	910 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	GPR158	Q5T848	1215 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	TRMT10B	Q6PF06	316 aa	Known RBP	11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	PRPF39	Q86UA1	669 aa	Known RBP	11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	UNC5B	Q8IZJ1	945 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	CNTD1	Q8N815	330 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	DTX3L	Q8TDB6	740 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	PLD4	Q96BZ4	506 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	IFT43	Q96FT9	208 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	APOL5	Q9BWW9	433 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	ACSS3	Q9H6R3	686 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	CNOT10	Q9H9A5	744 aa	Known RBP	11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	LRRC40	Q9H9A6	602 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	MAN1C1	Q9NR34	630 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	TMEM248	Q9NWD8	314 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	VPS28	Q9UK41	221 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	LZTS1	Q9Y250	596 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	GMEB1	Q9Y692	573 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	SPAG6	O75602	509 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	OXSR1	O95747	527 aa	Predicted RBP	11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	AP2A1	O95782	977 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	NDST2	P52849	883 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	GEM	P55040	296 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	BMPR2	Q13873	1038 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	RNF219	Q5W0B1	726 aa	Predicted RBP	11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	SPATA24	Q86W54	205 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	RELL1	Q8IUW5	271 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	MRPL43	Q8N983	215 aa	Known RBP	11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	GSDMB	Q8TAX9	411 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	ARNTL2	Q8WYA1	636 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	WBP2	Q969T9	261 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	IGFLR1	Q9H665	355 aa		11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	FNDC3A	Q9Y2H6	1198 aa	Known RBP	11.81	□□□□□ -0.52
LMO7-204	ENST00000377499	WDR91	A4D1P6	747 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	NVL	O15381	856 aa	Known RBP	11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	DNAJC6	O75061	913 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	KRT4	P19013	534 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	PPP3CC	P48454	512 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	PDE1B	Q01064	536 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	MROH9	Q5TGP6	573 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	MANEAL	Q5VSG8	457 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	RASSF3	Q86WH2	238 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	ING5	Q8WYH8	240 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	RETREG1	Q9H6L5	497 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499		A0A1W2PPM1	405 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499		E7ESA3	106 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	C1R	P00736	705 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	EPCAM	P16422	314 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	DSC2	Q02487	901 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	GNA12	Q03113	381 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	CDH17	Q12864	832 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	KRT72	Q14CN4	511 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	LINGO4	Q6UY18	593 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	LRRC34	Q8IZ02	419 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	RYBP	Q8N488	228 aa	Predicted RBP	11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	SPPL3	Q8TCT6	385 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	HERVK_113	Q902F9	699 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	LRRC39	Q96DD0	335 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	OXNAD1	Q96HP4	312 aa	Predicted RBP	11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	SIGLEC10	Q96LC7	697 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	MYRFL	Q96LU7	910 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	PRMT1	Q99873	361 aa	Known RBP	11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	CINP	Q9BW66	212 aa	Predicted RBP	11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	SLC13A1	Q9BZW2	595 aa		11.8	□□□□□ -0.52
LMO7-204	ENST00000377499	SLC24A2	Q9UI40	661 aa		11.8	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms