RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 GPAT3Q53EU6 434 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 HIST3H2AQ7L7L0 130 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 NPAS4Q8IUM7 802 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 OR4L1Q8NH43 312 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 ZFP28Q8NHY6 868 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 ITFG1Q8TB96 612 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 NDRG1Q92597 394 aaKnown RBP13.72□□□□□ -0.21
GPC6-201ENST00000377047 HIST1H2ACQ93077 130 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 PDZD7Q9H5P4 517 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 IMP3Q9NV31 184 aaKnown RBP13.72□□□□□ -0.21
GPC6-201ENST00000377047 ARMCX1Q9P291 453 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 NDRG2Q9UN36 371 aaKnown RBP13.72□□□□□ -0.21
GPC6-201ENST00000377047 NCANO14594 1321 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 NFATC1O95644 943 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 SEC13P55735 322 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 CHST9Q7L1S5 443 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 PAGE2Q7Z2X7 111 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 KLHL23Q8NBE8 558 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 VSTM1Q6UX27 236 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 RAVER1Q8IY67 606 aaKnown RBP13.72□□□□□ -0.21
GPC6-201ENST00000377047 BTN2A3PQ96KV6 586 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 ARIH1Q9Y4X5 557 aaPredicted RBP13.72□□□□□ -0.21
GPC6-201ENST00000377047 AP4S1Q9Y587 144 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 hCG_1818297A0A087WSY0 165 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 FAM25AB3EWG3 89 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 FAM25CB3EWG5 89 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 FAM25GB3EWG6 89 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 CD3EAPO15446 510 aaKnown RBP13.72□□□□□ -0.21
GPC6-201ENST00000377047 ITGAVP06756 1048 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 LBPP18428 481 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 TSPAN8P19075 237 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 FUT10Q6P4F1 479 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 ZC3H7AQ8IWR0 971 aaKnown RBP13.72□□□□□ -0.21
GPC6-201ENST00000377047 ZFP14Q9HCL3 533 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 SLC9A8Q9Y2E8 581 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 PEX11AO75192 247 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 SLC5A3P53794 718 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 OASLQ15646 514 aaKnown RBP13.72□□□□□ -0.21
GPC6-201ENST00000377047 ARSHQ5FYA8 562 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 SPATA6LQ8N4H0 392 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 SCAIQ8N9R8 606 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 ZSCAN18Q8TBC5 510 aaPredicted RBP13.72□□□□□ -0.21
GPC6-201ENST00000377047 MAGEA13PA6NCF6 341 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 PAPSS1O43252 624 aaPredicted RBP13.71□□□□□ -0.21
GPC6-201ENST00000377047 CLDN11O75508 207 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 CBX2Q14781 532 aaPredicted RBP13.71□□□□□ -0.21
GPC6-201ENST00000377047 PPP1R15BQ5SWA1 713 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 HDAC10Q969S8 669 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 MCRS1Q96EZ8 462 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 BTBD9Q96Q07 612 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 TRMT13Q9NUP7 481 aaKnown RBP13.71□□□□□ -0.21
GPC6-201ENST00000377047 PCDHGC5Q9Y5F6 944 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 EPHB6O15197 1021 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 RNASEH2AO75792 299 aaKnown RBP13.71□□□□□ -0.21
GPC6-201ENST00000377047 LYPLA2O95372 231 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 MLYCDO95822 493 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 C1RP00736 705 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 LDLRP01130 860 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 ACRP10323 421 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 RAB10P61026 200 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 CTBP1Q13363 440 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 DGKKQ5KSL6 1271 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 KCTD4Q8WVF5 259 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 SLC25A23Q9BV35 468 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 ABCG8Q9H221 673 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 KLHL1Q9NR64 748 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 ARL5CA6NH57 179 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 TGFB1I1O43294 461 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 B4GALT4O60513 344 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 FKBP6O75344 327 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 GCATO75600 419 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 DLGAP3O95886 979 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 FGF1P05230 155 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 EPHX1P07099 455 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 KELP23276 732 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 PSMB9P28065 219 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 LRPAP1P30533 357 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 SERPINB1P30740 379 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 LINGO1Q96FE5 620 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 COPS8Q99627 209 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 CLIC5Q9NZA1 410 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 A0A0G2JLL6 359 aaPredicted RBP13.71□□□□□ -0.21
GPC6-201ENST00000377047 TAS2R40P59535 323 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 GRM3Q14832 879 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 HYIQ5T013 277 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 C16orf62Q7Z3J2 963 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 PRRT2Q7Z6L0 340 aaPredicted RBP13.71□□□□□ -0.21
GPC6-201ENST00000377047 TMPRSS6Q8IU80 811 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 CREG2Q8IUH2 290 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 JOSD2Q8TAC2 188 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 UPF1Q92900 1129 aaKnown RBP eCLIP13.71□□□□□ -0.211e-6■■■■□ 22.4
GPC6-201ENST00000377047 IKZF4Q9H2S9 585 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 DUS2Q9NX74 493 aaKnown RBP13.71□□□□□ -0.21
GPC6-201ENST00000377047 CHKBQ9Y259 395 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 BTRCQ9Y297 605 aa13.71□□□□□ -0.21
GPC6-201ENST00000377047 NEURL4Q96JN8 1562 aa13.71□□□□□ -0.22
GPC6-201ENST00000377047 LGR5O75473 907 aa13.71□□□□□ -0.22
GPC6-201ENST00000377047 KRT33AO76009 404 aa13.71□□□□□ -0.22
GPC6-201ENST00000377047 PCCBP05166 539 aa13.71□□□□□ -0.22
GPC6-201ENST00000377047 MARCKSL1P49006 195 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms