RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ARMC1Q9NVT9 282 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 OCM2P0CE71 109 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 OCMP0CE72 109 aaPredicted RBP16.66■□□□□ 0.26
TRIM39-201ENST00000376656 CYP2C8P10632 490 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 UGT1A1P22309 533 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 UGT1A4P22310 534 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 EDNRBP24530 442 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 UGT1A3P35503 534 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 UGT1A5P35504 534 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 NPY2RP49146 381 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 MERTKQ12866 999 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 NME3Q13232 169 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 PPIL2Q13356 520 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 ARHGAP17Q68EM7 881 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 TNIP2Q8NFZ5 429 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 UPF3AQ9H1J1 476 aaKnown RBP16.66■□□□□ 0.26
TRIM39-201ENST00000376656 TUT1Q9H6E5 874 aaKnown RBP16.66■□□□□ 0.26
TRIM39-201ENST00000376656 ZNF232Q9UNY5 417 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 MAGEB16A2A368 324 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 NRP2O60462 931 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 INHBBP09529 407 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 ERCC2P18074 760 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 RAB10P61026 200 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 GSTM4Q03013 218 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 TBCELQ5QJ74 424 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 C8orf82Q6P1X6 216 aaPredicted RBP16.65■□□□□ 0.26
TRIM39-201ENST00000376656 FLAD1Q8NFF5 587 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 TANKQ92844 425 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 LRCH3Q96II8 777 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 MRPL46Q9H2W6 279 aaKnown RBP16.65■□□□□ 0.26
TRIM39-201ENST00000376656 ARMC7Q9H6L4 198 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 SHROOM3Q8TF72 1996 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 TRIM64A6NGJ6 449 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 K7EPI3 171 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 BCAT1P54687 386 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 PDCD4Q53EL6 469 aaKnown RBP16.65■□□□□ 0.26
TRIM39-201ENST00000376656 PLPPR4Q7Z2D5 763 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 PIWIL4Q7Z3Z4 852 aaKnown RBP16.65■□□□□ 0.26
TRIM39-201ENST00000376656 CAMK1DQ8IU85 385 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 NIM1KQ8IY84 436 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 OFCC1Q8IZS5 231 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 CENPSQ8N2Z9 138 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 CHST13Q8NET6 341 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 CYGBQ8WWM9 190 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 GBA3Q9H227 469 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 FAM124BQ9H5Z6 455 aaPredicted RBP16.65■□□□□ 0.26
TRIM39-201ENST00000376656 POLR1BQ9H9Y6 1135 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 HOXC10Q9NYD6 342 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 NUP205Q92621 2012 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 KCNA5P22460 613 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 DCKP27707 260 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 GRAMD4Q6IC98 578 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 FAM45BPQ6NSW5 357 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 NPWQ8N729 165 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 DDHD1Q8NEL9 900 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 SHCBP1Q8NEM2 672 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 FAM45AQ8TCE6 357 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 HEXDCQ8WVB3 486 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 DOK1Q99704 481 aa16.65■□□□□ 0.26
TRIM39-201ENST00000376656 FAM95CA0A1B0GW59 222 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 J3QRK9 145 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 GPC4O75487 556 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 ZNF189O75820 626 aaPredicted RBP16.64■□□□□ 0.25
TRIM39-201ENST00000376656 TGFB3P10600 412 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 STMN1P16949 149 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 LMO2P25791 158 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 YWHAQP27348 245 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 SCNN1AP37088 669 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 MAPK10P53779 464 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 ATP1A4Q13733 1029 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 SLC36A3Q495N2 470 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 DCLRE1AQ6PJP8 1040 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 COPS5Q92905 334 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 FBXL8Q96CD0 374 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 MEAF6Q9HAF1 191 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 IL1RL2Q9HB29 575 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 CCM2LQ9NUG4 571 aaPredicted RBP16.64■□□□□ 0.25
TRIM39-201ENST00000376656 WDR37Q9Y2I8 494 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 M0QYT0 321 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 GJA9P57773 515 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 FAM187BQ17R55 369 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 INTS11Q5TA45 600 aaKnown RBP16.64■□□□□ 0.25
TRIM39-201ENST00000376656 KRT27Q7Z3Y8 459 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 SPPL2CQ8IUH8 684 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 SLC25A23Q9BV35 468 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 FBRSL1Q9HCM7 1045 aaKnown RBP16.64■□□□□ 0.25
TRIM39-201ENST00000376656 EGFL7Q9UHF1 273 aa16.64■□□□□ 0.25
TRIM39-201ENST00000376656 RNF103-CHMP3A0A140T963 221 aa16.63■□□□□ 0.25
TRIM39-201ENST00000376656 VTNP04004 478 aa16.63■□□□□ 0.25
TRIM39-201ENST00000376656 HSPA8P11142 646 aaKnown RBP16.63■□□□□ 0.25
TRIM39-201ENST00000376656 MAP7D1Q3KQU3 841 aa16.63■□□□□ 0.25
TRIM39-201ENST00000376656 SYPL2Q5VXT5 272 aa16.63■□□□□ 0.25
TRIM39-201ENST00000376656 C16orf87Q6PH81 154 aa16.63■□□□□ 0.25
TRIM39-201ENST00000376656 CHST15Q7LFX5 561 aaPredicted RBP16.63■□□□□ 0.25
TRIM39-201ENST00000376656 RETREG3Q86VR2 466 aa16.63■□□□□ 0.25
TRIM39-201ENST00000376656 PACRGLQ8N7B6 248 aa16.63■□□□□ 0.25
TRIM39-201ENST00000376656 ZNF420Q8TAQ5 688 aaPredicted RBP16.63■□□□□ 0.25
TRIM39-201ENST00000376656 SLC2A14Q8TDB8 520 aa16.63■□□□□ 0.25
TRIM39-201ENST00000376656 SLC35B4Q969S0 331 aa16.63■□□□□ 0.25
TRIM39-201ENST00000376656 SPATA33Q96N06 139 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms