RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 WDR59Q6PJI9 974 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 IGF2-ASQ6U949 168 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 MACC1Q6ZN28 852 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 RBM43Q6ZSC3 357 aaKnown RBP14.94□□□□□ -0.02
HDAC6-204ENST00000376643 GPR155Q7Z3F1 870 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 DNAAF5Q86Y56 855 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 UMODL1-AS1Q8N2C9 162 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 CCDC185Q8N715 623 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 OR6K2Q8NGY2 324 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 LMX1AQ8TE12 382 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 VCPIP1Q96JH7 1222 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 FCRL3Q96P31 734 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-204ENST00000376643 ERGIC2Q96RQ1 377 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 PRORYQ9H606 182 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 POLR1BQ9H9Y6 1135 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 NDFIP2Q9NV92 336 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 FANCLQ9NW38 375 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 LIMA1Q9UHB6 759 aaKnown RBP14.94□□□□□ -0.02
HDAC6-204ENST00000376643 DOLKQ9UPQ8 538 aa14.94□□□□□ -0.02
HDAC6-204ENST00000376643 FAM170AA1A519 330 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 EME2A4GXA9 379 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-204ENST00000376643 FAM72CH0Y354 149 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 RAD51BO15315 384 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 CREB3O43889 395 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 USP12O75317 370 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 CSO75390 466 aaKnown RBP14.93□□□□□ -0.02
HDAC6-204ENST00000376643 ALPIP09923 528 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 GIMD1P0DJR0 217 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 RBMS1P29558 406 aaKnown RBP14.93□□□□□ -0.02
HDAC6-204ENST00000376643 TPI1P60174 286 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 GABREP78334 506 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 PPARDQ03181 441 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 C19orf57Q0VDD7 668 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 PTP4A2Q12974 167 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 ELOCQ15369 112 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 ZNF542PQ5EBM4 170 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 FAM72AQ5TYM5 149 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 FAM72DQ6L9T8 149 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 BRAT1Q6PJG6 821 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 LVRNQ6Q4G3 990 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 RBM44Q6ZP01 1051 aaKnown RBP14.93□□□□□ -0.02
HDAC6-204ENST00000376643 MON1BQ7L1V2 547 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 PHLDB2Q86SQ0 1253 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 VPS36Q86VN1 386 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 FAM72BQ86X60 149 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 PHACTR4Q8IZ21 702 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 CENPTQ96BT3 561 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 ZNF641Q96N77 438 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-204ENST00000376643 MCEEQ96PE7 176 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 TUBGCP5Q96RT8 1024 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 AGPAT1Q99943 283 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 NAT10Q9H0A0 1025 aaKnown RBP14.93□□□□□ -0.02
HDAC6-204ENST00000376643 UBA2Q9UBT2 640 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-204ENST00000376643 MYO6Q9UM54 1294 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 NEU3Q9UQ49 428 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 BAHCC1Q9P281 2608 aa14.93□□□□□ -0.02
HDAC6-204ENST00000376643 ITPR1Q14643 2758 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 CPED1A4D0V7 1026 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 LRRC10BA6NIK2 292 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 RASA4BC9J798 803 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 LMO7DNF2Z398 122 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 TMX2-CTNND1H3BSU7 103 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 RNF103O00237 685 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 ATXN7O15265 892 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-204ENST00000376643 CCP110O43303 1012 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 RASA4O43374 803 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 NFKBIAP25963 317 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 KLK7P49862 253 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 NDST2P52849 883 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 TMPRSS3P57727 454 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 SERINC3Q13530 473 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 LRRC14Q15048 493 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 ISXQ2M1V0 245 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 TMEM52BQ4KMG9 183 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 PRRT3Q5FWE3 981 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 C6orf132Q5T0Z8 1188 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 ATXN7L2Q5T6C5 722 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-204ENST00000376643 FAXCQ5TGI0 409 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 EFL1Q7Z2Z2 1120 aaKnown RBP14.92□□□□□ -0.02
HDAC6-204ENST00000376643 OR6C4Q8NGE1 309 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 DPH1Q9BZG8 443 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 LMBRD1Q9NUN5 540 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 FZD10Q9ULW2 581 aa14.92□□□□□ -0.02
HDAC6-204ENST00000376643 FASNP49327 2511 aaKnown RBP14.91□□□□□ -0.02
HDAC6-204ENST00000376643 CFAP69A5D8W1 941 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 ARHGAP42A6NI28 874 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 EPHB6O15197 1021 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 NEBLO76041 1014 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 CTSEP14091 401 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 ITPKBP27987 946 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 GKP32189 559 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 TLE3Q04726 772 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 CCDC173Q0VFZ6 552 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 EIF2B5Q13144 721 aaKnown RBP14.91□□□□□ -0.02
HDAC6-204ENST00000376643 RFTN1Q14699 578 aaPredicted RBP14.91□□□□□ -0.02
HDAC6-204ENST00000376643 CDKN3Q16667 212 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 DEFB133Q30KQ1 61 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 ACAD10Q6JQN1 1059 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 SPACA3Q8IXA5 215 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 PAF1Q8N7H5 531 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms