RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 MAFFQ9ULX9 164 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 LZTS1Q9Y250 596 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 MTCL1Q9Y4B5 1905 aaKnown RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 MAGEB16A2A368 324 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 SMAD6O43541 496 aaKnown RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 BGNP21810 368 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 GKP32189 559 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 CD70P32970 193 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 ETV4P43268 484 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 ARCN1P48444 511 aaKnown RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 SERPINB9P50453 376 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 SLC7A9P82251 487 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 IRF9Q00978 393 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 CDK18Q07002 472 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 ZNF460Q14592 562 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 ZNF789Q5FWF6 425 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 GKAP1Q5VSY0 366 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 FATE1Q969F0 183 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 TADA1Q96BN2 335 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 PSKH2Q96QS6 385 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 RBBP8Q99708 897 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 DDX50Q9BQ39 737 aaKnown RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 ZNF395Q9H8N7 513 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 GFRA2O00451 464 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 INSIG1O15503 277 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 DNAJC6O75061 913 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 ZMPSTE24O75844 475 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 TYK2P29597 1187 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 OVGP1Q12889 678 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 GRM3Q14832 879 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 PTAR1Q7Z6K3 402 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 PLD6Q8N2A8 252 aaKnown RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 ZNF75CPQ92670 426 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 USP13Q92995 863 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 RPL10LQ96L21 214 aaKnown RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 CPNE1Q99829 537 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 MGME1Q9BQP7 344 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 SSU72Q9NP77 194 aaKnown RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 VPS45Q9NRW7 570 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 TREX1Q9NSU2 369 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 FNDC3AQ9Y2H6 1198 aaKnown RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 SPO11Q9Y5K1 396 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 LOC285095A0A1B0GVY8 99 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 SRRM3A6NNA2 597 aaPredicted RBP12.71□□□□□ -0.37
CLCN6-206ENST00000376496 AHSGP02765 367 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 SERPINF2P08697 491 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 NEFHP12036 1026 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 PTPN2P17706 415 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 SLC8A1P32418 973 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 SLC1A2P43004 574 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 GPM6BQ13491 265 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 PDK4Q16654 411 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 CES4AQ5XG92 561 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 ZNF470Q6ECI4 717 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 HTR3DQ70Z44 454 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 TMEM25Q86YD3 366 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 MFSD6LQ8IWD5 586 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 OTUD6BQ8N6M0 293 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 OR13J1Q8NGT2 312 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 LRRC8CQ8TDW0 803 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 ALKBH8Q96BT7 664 aaKnown RBP12.71□□□□□ -0.37
CLCN6-206ENST00000376496 ALG14Q96F25 216 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 VPS39Q96JC1 886 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 SCUBE2Q9NQ36 999 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 SNX15Q9NRS6 342 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 STK39Q9UEW8 545 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 SLC39A10Q9ULF5 831 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 OR51B4Q9Y5P0 310 aa12.71□□□□□ -0.37
CLCN6-206ENST00000376496 TRIM24O15164 1050 aa12.71□□□□□ -0.38
CLCN6-206ENST00000376496 PHGDHO43175 533 aaKnown RBP12.71□□□□□ -0.38
CLCN6-206ENST00000376496 PRSS56P0CW18 603 aa12.71□□□□□ -0.38
CLCN6-206ENST00000376496 CCNFP41002 786 aa12.71□□□□□ -0.38
CLCN6-206ENST00000376496 CTSOP43234 321 aaPredicted RBP12.71□□□□□ -0.38
CLCN6-206ENST00000376496 MAGEA10P43363 369 aaPredicted RBP12.71□□□□□ -0.38
CLCN6-206ENST00000376496 SERPINB4P48594 390 aa12.71□□□□□ -0.38
CLCN6-206ENST00000376496 LMAN2Q12907 356 aa12.71□□□□□ -0.38
CLCN6-206ENST00000376496 TMC5Q6UXY8 1006 aa12.71□□□□□ -0.38
CLCN6-206ENST00000376496 CACNA2D3Q8IZS8 1091 aa12.71□□□□□ -0.38
CLCN6-206ENST00000376496 OR13C4Q8NGS5 318 aa12.71□□□□□ -0.38
CLCN6-206ENST00000376496 OR6P1Q8NGX9 317 aa12.71□□□□□ -0.38
CLCN6-206ENST00000376496 RMDN1Q96DB5 314 aa12.71□□□□□ -0.38
CLCN6-206ENST00000376496 MTBPQ96DY7 904 aa12.71□□□□□ -0.38
CLCN6-206ENST00000376496 PITPNM3Q9BZ71 974 aa12.71□□□□□ -0.38
CLCN6-206ENST00000376496 MTIF3Q9H2K0 278 aaKnown RBP12.71□□□□□ -0.38
CLCN6-206ENST00000376496 ARNT2Q9HBZ2 717 aa12.71□□□□□ -0.38
CLCN6-206ENST00000376496 FBXO6Q9NRD1 293 aaPredicted RBP12.71□□□□□ -0.38
CLCN6-206ENST00000376496 PLLPQ9Y342 182 aa12.71□□□□□ -0.38
CLCN6-206ENST00000376496 TYW5A2RUC4 315 aaKnown RBP12.7□□□□□ -0.38
CLCN6-206ENST00000376496 RFXAPO00287 272 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 TM9SF1O15321 606 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 BNIP3LO60238 219 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 CEBPBP17676 345 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 STK19P49842 368 aaPredicted RBP12.7□□□□□ -0.38
CLCN6-206ENST00000376496 LIMK2P53671 638 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 SLC18A1P54219 525 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 TSTD2Q5T7W7 516 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 GRTP1Q5TC63 336 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 PDPK2PQ6A1A2 396 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 ZCCHC23Q6ZST2 131 aa12.7□□□□□ -0.38
CLCN6-206ENST00000376496 PIGWQ7Z7B1 504 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms