RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 AIF1P55008 147 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 HDAC4P56524 1084 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 ELP6Q0PNE2 266 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 GRM3Q14832 879 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 PRRT3Q5FWE3 981 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 FKBP15Q5T1M5 1219 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 FAM72AQ5TYM5 149 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 FAM72DQ6L9T8 149 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 SLFN11Q7Z7L1 901 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 FAM72BQ86X60 149 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 ZNF354CQ86Y25 554 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 FSTL5Q8N475 847 aaPredicted RBP23.5■■□□□ 1.35
C9orf47-202ENST00000375850 RTL3Q8N8U3 475 aaKnown RBP23.5■■□□□ 1.35
C9orf47-202ENST00000375850 JOSD2Q8TAC2 188 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 SNRNP27Q8WVK2 155 aaKnown RBP23.5■■□□□ 1.35
C9orf47-202ENST00000375850 SCG3Q8WXD2 468 aaKnown RBP23.5■■□□□ 1.35
C9orf47-202ENST00000375850 VCPIP1Q96JH7 1222 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 SLC46A1Q96NT5 459 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 SELENOOQ9BVL4 669 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 CPEB1Q9BZB8 566 aaKnown RBP23.5■■□□□ 1.35
C9orf47-202ENST00000375850 GGT7Q9UJ14 662 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 SATB2Q9UPW6 733 aa23.5■■□□□ 1.35
C9orf47-202ENST00000375850 UNGP13051 313 aaPredicted RBP23.49■■□□□ 1.35
C9orf47-202ENST00000375850 GPD1P21695 349 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 IGFALSP35858 605 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 STAT1P42224 750 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 JAM2P57087 298 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 POLR2FP61218 127 aaKnown RBP23.49■■□□□ 1.35
C9orf47-202ENST00000375850 PPARDQ03181 441 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 CFHR1Q03591 330 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 PARP15Q460N3 678 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 TAF1BQ53T94 588 aaPredicted RBP23.49■■□□□ 1.35
C9orf47-202ENST00000375850 C3orf38Q5JPI3 329 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 EFHC2Q5JST6 749 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 TPRG1LQ5T0D9 272 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 LVRNQ6Q4G3 990 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 ZNF605Q86T29 641 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 VPS36Q86VN1 386 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 ARL14Q8N4G2 192 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 C3orf20Q8ND61 904 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 ENOX1Q8TC92 643 aaKnown RBP23.49■■□□□ 1.35
C9orf47-202ENST00000375850 VOPP1Q96AW1 172 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 NAF1Q96HR8 494 aaKnown RBP23.49■■□□□ 1.35
C9orf47-202ENST00000375850 LRRC61Q9BV99 259 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 TAB2Q9NYJ8 693 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 CHMP5Q9NZZ3 219 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 ADAM22Q9P0K1 906 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 ENTPD2Q9Y5L3 495 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 SHROOM3Q8TF72 1996 aa23.49■■□□□ 1.35
C9orf47-202ENST00000375850 FAM170AA1A519 330 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 ANKRD62A6NC57 917 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 KLK10O43240 276 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 DESP17661 470 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 CHRNB2P17787 502 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 XPAP23025 273 aaPredicted RBP23.48■■□□□ 1.35
C9orf47-202ENST00000375850 EPHB2P29323 1055 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 ADKP55263 362 aaKnown RBP23.48■■□□□ 1.35
C9orf47-202ENST00000375850 RHOAP61586 193 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 ELOCQ15369 112 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 RAB6CQ53S08 254 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 ATXN7L2Q5T6C5 722 aaPredicted RBP23.48■■□□□ 1.35
C9orf47-202ENST00000375850 FAXCQ5TGI0 409 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 PHF13Q86YI8 300 aaPredicted RBP23.48■■□□□ 1.35
C9orf47-202ENST00000375850 RBFAQ8N0V3 343 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 ZNF843Q8N446 348 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 CCDC185Q8N715 623 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 ATL2Q8NHH9 583 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 WDR36Q8NI36 951 aaKnown RBP23.48■■□□□ 1.35
C9orf47-202ENST00000375850 SLC30A5Q8TAD4 765 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 EPAS1Q99814 870 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 RAB6CQ9H0N0 254 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 CATSPERBQ9H7T0 1116 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 CAAP1Q9H8G2 361 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 SSUH2Q9Y2M2 353 aa23.48■■□□□ 1.35
C9orf47-202ENST00000375850 WASH4PA8MWX3 477 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 MUSKO15146 869 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 MMP20O60882 483 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 GCATO75600 419 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 ALPIP09923 528 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 HTR7P34969 479 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 RFC1P35251 1148 aaPredicted RBP23.47■■□□□ 1.35
C9orf47-202ENST00000375850 EIF4A3P38919 411 aaKnown RBP23.47■■□□□ 1.35
C9orf47-202ENST00000375850 SKOR1P84550 965 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 VAC14Q08AM6 782 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 PTP4A2Q12974 167 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 SYCP1Q15431 976 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 TMEM52BQ4KMG9 183 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 SLC35F3Q8IY50 421 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 TP53I13Q8NBR0 393 aaPredicted RBP23.47■■□□□ 1.35
C9orf47-202ENST00000375850 ATXN7L3BQ96GX2 97 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 FAM207AQ9NSI2 230 aaPredicted RBP23.47■■□□□ 1.35
C9orf47-202ENST00000375850 PADI4Q9UM07 663 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 DOLKQ9UPQ8 538 aa23.47■■□□□ 1.35
C9orf47-202ENST00000375850 KALRNO60229 2985 aa23.46■■□□□ 1.35
C9orf47-202ENST00000375850 SIGLEC16A6NMB1 481 aa23.46■■□□□ 1.35
C9orf47-202ENST00000375850 TMX2-CTNND1H3BSU7 103 aa23.46■■□□□ 1.35
C9orf47-202ENST00000375850 YY2O15391 372 aa23.46■■□□□ 1.35
C9orf47-202ENST00000375850 FGF10O15520 208 aaPredicted RBP23.46■■□□□ 1.35
C9orf47-202ENST00000375850 TDRD6O60522 2096 aaKnown RBP23.46■■□□□ 1.35
C9orf47-202ENST00000375850 HTR1BP28222 390 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms