RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 FEM1AQ9BSK4 669 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 MAGEB5Q9BZ81 275 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 KCNF1Q9H3M0 494 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 ASCL3Q9NQ33 180 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 NCKIPSDQ9NZQ3 722 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 IP6K2Q9UHH9 426 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 SALL4Q9UJQ4 1053 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 ADGRG1Q9Y653 693 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 ZNF462Q96JM2 2506 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.37□□□□□ -0.43
LSM2-208ENST00000375661 A0A0A6YYK5 440 aaPredicted RBP12.37□□□□□ -0.43
LSM2-208ENST00000375661 A0A1W2PQU0 124 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 B8ZZF3 427 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 SCAMP1O15126 338 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 SLC31A1O15431 190 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 FFAR2O15552 330 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 USP12O75317 370 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 CSO75390 466 aaKnown RBP12.37□□□□□ -0.43
LSM2-208ENST00000375661 LRCH4O75427 683 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 PROSCO94903 275 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 IPO7O95373 1038 aaKnown RBP12.37□□□□□ -0.43
LSM2-208ENST00000375661 MPOP05164 745 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 C6P13671 934 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 MIPP30301 263 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 HNRNPKP61978 463 aaKnown RBP eCLIP12.37□□□□□ -0.43
LSM2-208ENST00000375661 VAC14Q08AM6 782 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 ZNF177Q13360 481 aaPredicted RBP12.37□□□□□ -0.43
LSM2-208ENST00000375661 AUHQ13825 339 aaKnown RBP12.37□□□□□ -0.43
LSM2-208ENST00000375661 PIGHQ14442 188 aaPredicted RBP12.37□□□□□ -0.43
LSM2-208ENST00000375661 PIP5KL1Q5T9C9 394 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 ARHGAP40Q5TG30 622 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 FBXL22Q6P050 247 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 SCYL2Q6P3W7 929 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 Q6ZVU0 165 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 CYP4V2Q6ZWL3 525 aaPredicted RBP12.37□□□□□ -0.43
LSM2-208ENST00000375661 ABI3BPQ7Z7G0 1075 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 TMIEQ8NEW7 156 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 TTC9Q92623 222 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 CCDC97Q96F63 343 aaPredicted RBP12.37□□□□□ -0.43
LSM2-208ENST00000375661 ZNF830Q96NB3 372 aaPredicted RBP12.37□□□□□ -0.43
LSM2-208ENST00000375661 HAPLN3Q96S86 360 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 ABCG4Q9H172 646 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 OSBPL2Q9H1P3 480 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 CPNE5Q9HCH3 593 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 LUC7LQ9NQ29 371 aaKnown RBP12.37□□□□□ -0.43
LSM2-208ENST00000375661 UCKL1Q9NWZ5 548 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 PCSK1NQ9UHG2 260 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 HS3ST2Q9Y278 367 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 PAXBP1Q9Y5B6 917 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 OR51B4Q9Y5P0 310 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 HS3ST3A1Q9Y663 406 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 DUSP10Q9Y6W6 482 aa12.37□□□□□ -0.43
LSM2-208ENST00000375661 DOCK4Q8N1I0 1966 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 A6NNZ2 444 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 BTNL10A8MVZ5 291 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 KLK10O43240 276 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 CLDN11O75508 207 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 RNF8O76064 485 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 PRNPP04156 253 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 IL1R2P27930 398 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 PCK1P35558 622 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 MLLT3P42568 568 aaPredicted RBP12.36□□□□□ -0.43
LSM2-208ENST00000375661 IRAK1P51617 712 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 HADHBP55084 474 aaKnown RBP12.36□□□□□ -0.43
LSM2-208ENST00000375661 MESDQ14696 234 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 ZNF284Q2VY69 593 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 ARL13BQ3SXY8 428 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 POM121L1PQ3SYA9 428 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 C5orf22Q49AR2 442 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 SLFN11Q7Z7L1 901 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 ZSCAN30Q86W11 494 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 CIR1Q86X95 450 aaPredicted RBP12.36□□□□□ -0.43
LSM2-208ENST00000375661 OR13H1Q8NG92 308 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 TPCN2Q8NHX9 752 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 MAPK15Q8TD08 544 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 NAF1Q96HR8 494 aaKnown RBP12.36□□□□□ -0.43
LSM2-208ENST00000375661 C1orf74Q96LT6 269 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 RPRD1AQ96P16 312 aaPredicted RBP12.36□□□□□ -0.43
LSM2-208ENST00000375661 CALN1Q9BXU9 219 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 SIK2Q9H0K1 926 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 DYRK4Q9NR20 520 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 GPR27Q9NS67 375 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 VPS28Q9UK41 221 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 FZD10Q9ULW2 581 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 CA5BQ9Y2D0 317 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 TBC1D30Q9Y2I9 924 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 PCDHGA8Q9Y5G5 932 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 CSNK1G3Q9Y6M4 447 aa12.36□□□□□ -0.43
LSM2-208ENST00000375661 LY6G6EA0A0G2JKS1 128 aa12.35□□□□□ -0.43
LSM2-208ENST00000375661 DRGXA6NNA5 263 aa12.35□□□□□ -0.43
LSM2-208ENST00000375661 FAM72CH0Y354 149 aa12.35□□□□□ -0.43
LSM2-208ENST00000375661 H3BM21 787 aa12.35□□□□□ -0.43
LSM2-208ENST00000375661 K7ESM1 405 aa12.35□□□□□ -0.43
LSM2-208ENST00000375661 PTMAP06454 111 aaKnown RBP12.35□□□□□ -0.43
LSM2-208ENST00000375661 CTSLP07711 333 aa12.35□□□□□ -0.43
LSM2-208ENST00000375661 SRCP12931 536 aa12.35□□□□□ -0.43
LSM2-208ENST00000375661 PRLRP16471 622 aa12.35□□□□□ -0.43
LSM2-208ENST00000375661 DESP17661 470 aa12.35□□□□□ -0.43
LSM2-208ENST00000375661 RBMS1P29558 406 aaKnown RBP12.35□□□□□ -0.43
LSM2-208ENST00000375661 CHRNA3P32297 505 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms