RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 NPR3P17342 541 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 CCR1P32246 355 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 ICAM3P32942 547 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 SNAPC2Q13487 334 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 MGAT5BQ3V5L5 792 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 C16orf87Q6PH81 154 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 PDZD4Q76G19 769 aaPredicted RBP11.9□□□□□ -0.5
MCF2L-202ENST00000375597 ARRDC4Q8NCT1 418 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 PSD4Q8NDX1 1056 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 TMEM174Q8WUU8 243 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 DGCR6LQ9BY27 220 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 MID1IP1Q9NPA3 183 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 ACTL7AQ9Y615 435 aa11.9□□□□□ -0.5
MCF2L-202ENST00000375597 UNC80Q8N2C7 3258 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 TREHO43280 583 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 BNIP3LO60238 219 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 SOAT2O75908 522 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 SRP72O76094 671 aaKnown RBP11.89□□□□□ -0.51
MCF2L-202ENST00000375597 AP2A1O95782 977 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 MAGP20916 626 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 RGS2P41220 211 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 OAZ1P54368 228 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 ZNF423Q2M1K9 1284 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 ZC3HC1Q86WB0 502 aaKnown RBP11.89□□□□□ -0.51
MCF2L-202ENST00000375597 KBTBD7Q8WVZ9 684 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 TNIP3Q96KP6 325 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 DNAAF2Q9NVR5 837 aaKnown RBP11.89□□□□□ -0.51
MCF2L-202ENST00000375597 MAGED1Q9Y5V3 778 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-202ENST00000375597 A8MX80 341 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 ANGPT2O15123 496 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 PABPC4LP0CB38 370 aaKnown RBP11.89□□□□□ -0.51
MCF2L-202ENST00000375597 TGFB3P10600 412 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 CNTFP26441 200 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 CYP51A1Q16850 503 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 ARL13BQ3SXY8 428 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 RABL3Q5HYI8 236 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 C6orf10Q5SRN2 563 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 REP15Q6BDI9 236 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 PGM2L1Q6PCE3 622 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 CUZD1Q86UP6 607 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 CENPLQ8N0S6 344 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-202ENST00000375597 PCED1BQ96HM7 432 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 TMEM209Q96SK2 561 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 SPON2Q9BUD6 331 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 FBXO5Q9UKT4 447 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 U3KQV3 271 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 COL11A2P13942 1736 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-202ENST00000375597 ZNF646O15015 1829 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-202ENST00000375597 USP34Q70CQ2 3546 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 MOXD2PA6NHM9 499 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 SOCS2O14508 198 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 SOCS7O14512 581 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 NRP2O60462 931 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 KATNA1O75449 491 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 TSHRP16473 764 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 CD86P42081 329 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 LILRA4P59901 499 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 CDH17Q12864 832 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 MAPK11Q15759 364 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 OGFOD2Q6N063 350 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 NOTUMQ6P988 496 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 SLC27A1Q6PCB7 646 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 CLEC20AQ6ZU45 233 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 MFSD6LQ8IWD5 586 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 EFHBQ8N7U6 833 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 CNTD1Q8N815 330 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 CDC26Q8NHZ8 85 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 PRICKLE1Q96MT3 831 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-202ENST00000375597 CDK15Q96Q40 435 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 MTG1Q9BT17 334 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-202ENST00000375597 FAM96AQ9H5X1 160 aa11.89□□□□□ -0.51
MCF2L-202ENST00000375597 ABI2Q9NYB9 513 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-202ENST00000375597 MICAL3Q7RTP6 2002 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 A0A1W2PPW3 197 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 SUPT3HB4E1H0 165 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 PTGES3LE9PB15 166 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 HARS2P49590 506 aaKnown RBP11.88□□□□□ -0.51
MCF2L-202ENST00000375597 SCNN1GP51170 649 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 RAB10P61026 200 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 ESRRGP62508 458 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 TRAF2Q12933 501 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 GALNT3Q14435 633 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 PTPRRQ15256 657 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 TMEM214Q6NUQ4 689 aaKnown RBP11.88□□□□□ -0.51
MCF2L-202ENST00000375597 NEPROQ6NW34 567 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 DHFR2Q86XF0 187 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 APOBEC3FQ8IUX4 373 aaKnown RBP11.88□□□□□ -0.51
MCF2L-202ENST00000375597 PPHLN1Q8NEY8 458 aaKnown RBP11.88□□□□□ -0.51
MCF2L-202ENST00000375597 BPIFB6Q8NFQ5 453 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 ANKRD49Q8WVL7 239 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 HDAC10Q969S8 669 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 ACOX2Q99424 681 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 TBCDQ9BTW9 1192 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 POLR1BQ9H9Y6 1135 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 PFDN4Q9NQP4 134 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 RRN3Q9NYV6 651 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 C1orf232A0A0U1RR37 186 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 TMCC1O94876 653 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 TBX18O95935 607 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 HOXA11P31270 313 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms