RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 FAM71DQ8N9W8 422 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 SUN5Q8TC36 379 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 TMEM174Q8WUU8 243 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 PPWD1Q96BP3 646 aaKnown RBP12.26□□□□□ -0.45
C9orf3-203ENST00000375315 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 RAD21L1Q9H4I0 556 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 VRTNQ9H8Y1 702 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 MARCH7Q9H992 704 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 NANOGQ9H9S0 305 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 EFCAB1Q9HAE3 211 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 TCF7L2Q9NQB0 619 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 DUS2Q9NX74 493 aaKnown RBP12.26□□□□□ -0.45
C9orf3-203ENST00000375315 RABL2BQ9UNT1 228 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 ST14Q9Y5Y6 855 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 A8MU76 341 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 TTC34A8MYJ7 566 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 CST8O60676 142 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 VDRP11473 427 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 KRT6CP48668 564 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 HARS2P49590 506 aaKnown RBP12.26□□□□□ -0.45
C9orf3-203ENST00000375315 GJA9P57773 515 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 C1QBPQ07021 282 aaKnown RBP12.26□□□□□ -0.45
C9orf3-203ENST00000375315 WDR45BQ5MNZ6 344 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 FAM182AQ5T1J6 154 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 FAXCQ5TGI0 409 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 TIFABQ6ZNK6 161 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 LRRC49Q8IUZ0 686 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 OR6B3Q8NGW1 331 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 FNIP1Q8TF40 1166 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 ASB9Q96DX5 294 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 MED30Q96HR3 178 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 CNDP1Q96KN2 507 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 GAD1Q99259 594 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 GTF2IRD1Q9UHL9 959 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 PSME2Q9UL46 239 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 N6AMT1Q9Y5N5 214 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 HAS3O00219 553 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 CLOCKO15516 846 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 PLIN3O60664 434 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 TOP3BO95985 862 aaKnown RBP12.26□□□□□ -0.45
C9orf3-203ENST00000375315 GSRP00390 522 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 POMCP01189 267 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 CSH1P0DML2 217 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 CSH2P0DML3 217 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 RALBP11234 206 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 ACO1P21399 889 aaKnown RBP12.26□□□□□ -0.45
C9orf3-203ENST00000375315 CNTFP26441 200 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 HOXD10P28358 340 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 IDUAP35475 653 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 RGS7P49802 495 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 RABGGTBP53611 331 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 IFITM2Q01629 132 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 RHDQ02161 417 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 PTK2BQ14289 1009 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 NEDD8Q15843 81 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 PHF13Q86YI8 300 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-203ENST00000375315 HERC6Q8IVU3 1022 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 TTC30BQ8N4P2 665 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 ACMSDQ8TDX5 336 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 RAB2BQ8WUD1 216 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 FAF2Q96CS3 445 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 NRBF2Q96F24 287 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 ZNF486Q96H40 463 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-203ENST00000375315 FAR2Q96K12 515 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 XYLT2Q9H1B5 865 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 GDAP2Q9NXN4 497 aa12.26□□□□□ -0.45
C9orf3-203ENST00000375315 CROCCQ5TZA2 2017 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 MBLAC1A4D2B0 266 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-203ENST00000375315 M0QX08 132 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 SLC22A2O15244 555 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 ADAMTS4O75173 837 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 JRKO75564 520 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 GRAP2O75791 330 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 CHRNA1P02708 482 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 HOXD8P13378 290 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-203ENST00000375315 GLDCP23378 1020 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 OPRL1P41146 370 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 NOMO3P69849 1222 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 RFTN1Q14699 578 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-203ENST00000375315 PCLAFQ15004 111 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 PGS1Q32NB8 556 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 SLC9A4Q6AI14 798 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 SIGIRRQ6IA17 410 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 BBS12Q6ZW61 710 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 RNF180Q86T96 592 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 ACOT1Q86TX2 421 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 AKAP14Q86UN6 197 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 C10orf107Q8IVU9 208 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 SH3YL1Q96HL8 342 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-203ENST00000375315 GLT1D1Q96MS3 346 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 C20orf96Q9NUD7 363 aaPredicted RBP12.25□□□□□ -0.45
C9orf3-203ENST00000375315 IPPQ9Y573 584 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 CASTOR2A6NHX0 329 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 CHADO15335 359 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 AVILO75366 819 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 VAPBO95292 243 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 HSPA4LO95757 839 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 HMGCRP04035 888 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 GRK4P32298 578 aa12.25□□□□□ -0.45
C9orf3-203ENST00000375315 MAPK10P53779 464 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms