RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 CSRP3P50461 194 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 RPL26P61254 145 aaKnown RBP12.35□□□□□ -0.43
UBR4-203ENST00000375225 IRF9Q00978 393 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 SATB1Q01826 763 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 DSG1Q02413 1049 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 KLF10Q13118 480 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 MARC1Q5VT66 337 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 CAPRIN2Q6IMN6 1127 aaKnown RBP12.35□□□□□ -0.43
UBR4-203ENST00000375225 NEPROQ6NW34 567 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 TMC7Q7Z402 723 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 LRRTM3Q86VH5 581 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 SLC41A1Q8IVJ1 513 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 COLGALT2Q8IYK4 626 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 FBXW8Q8N3Y1 598 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 CPSF7Q8N684 471 aaKnown RBP12.35□□□□□ -0.43
UBR4-203ENST00000375225 SPATA22Q8NHS9 363 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 DTX3LQ8TDB6 740 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 HASPINQ8TF76 798 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 PEX13Q92968 403 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 AZIN2Q96A70 460 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 BTN2A3PQ96KV6 586 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 PANX3Q96QZ0 392 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 NR1H4Q96RI1 486 aaPredicted RBP12.35□□□□□ -0.43
UBR4-203ENST00000375225 CDK5RAP1Q96SZ6 601 aaKnown RBP12.35□□□□□ -0.43
UBR4-203ENST00000375225 C1QTNF1Q9BXJ1 281 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 TREX1Q9NSU2 369 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 ZNF358Q9NW07 568 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 TMEM248Q9NWD8 314 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 ABI2Q9NYB9 513 aaPredicted RBP12.35□□□□□ -0.43
UBR4-203ENST00000375225 CLIC5Q9NZA1 410 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 SFMBT1Q9UHJ3 866 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 FBXO5Q9UKT4 447 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 HS3ST4Q9Y661 456 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 LTBP2Q14767 1821 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 NUP205Q92621 2012 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 DNAH12Q6ZR08 3092 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 A0A088AWK7 358 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.34□□□□□ -0.43
UBR4-203ENST00000375225 MAGEA13PA6NCF6 341 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 DCXO43602 365 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 EFCAB14O75071 495 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 TADA2AO75478 443 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 PIGNO95427 931 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 BAG2O95816 211 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 MT-CYBP00156 380 aaPredicted RBP12.34□□□□□ -0.43
UBR4-203ENST00000375225 TIMP1P01033 207 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 SLC35E2BP0CK96 405 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 CPB1P15086 417 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 RAG1P15918 1043 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 GLDCP23378 1020 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 IGFBP6P24592 240 aaPredicted RBP12.34□□□□□ -0.43
UBR4-203ENST00000375225 ARCN1P48444 511 aaKnown RBP12.34□□□□□ -0.43
UBR4-203ENST00000375225 NUMBP49757 651 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 WNT3AP56704 352 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 BTKQ06187 659 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 TBL3Q12788 808 aaKnown RBP12.34□□□□□ -0.43
UBR4-203ENST00000375225 USP4Q13107 963 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 MSLNQ13421 630 aaPredicted RBP12.34□□□□□ -0.43
UBR4-203ENST00000375225 CYLC2Q14093 348 aaPredicted RBP12.34□□□□□ -0.43
UBR4-203ENST00000375225 TRIP4Q15650 581 aaPredicted RBP12.34□□□□□ -0.43
UBR4-203ENST00000375225 SMAD1Q15797 465 aaKnown RBP12.34□□□□□ -0.43
UBR4-203ENST00000375225 PSMD5Q16401 504 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 PARP15Q460N3 678 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 CD300LGQ6UXG3 332 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 RANBP10Q6VN20 620 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 MAVSQ7Z434 540 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 SCD5Q86SK9 330 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 ZNF280BQ86YH2 543 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 LRRC43Q8N309 656 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 FSTL5Q8N475 847 aaPredicted RBP12.34□□□□□ -0.43
UBR4-203ENST00000375225 TMEM199Q8N511 208 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 CASD1Q96PB1 797 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 S100A14Q9HCY8 104 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 TLR8Q9NR97 1041 aaKnown RBP12.34□□□□□ -0.43
UBR4-203ENST00000375225 SPATS2LQ9NUQ6 558 aaKnown RBP12.34□□□□□ -0.43
UBR4-203ENST00000375225 CPSF2Q9P2I0 782 aaKnown RBP12.34□□□□□ -0.43
UBR4-203ENST00000375225 CDH22Q9UJ99 828 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 PLXNA3P51805 1871 aa12.34□□□□□ -0.43
UBR4-203ENST00000375225 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.33□□□□□ -0.44
UBR4-203ENST00000375225 ABHD14A-ACY1A0A1B0GW23 586 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 E2F8A0AVK6 867 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 TBKBP1A7MCY6 615 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 E9PBE3 544 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 KIAA0355O15063 1070 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 SLC7A4O43246 635 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 KLHL41O60662 606 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 SMNDC1O75940 238 aaKnown RBP eCLIP12.33□□□□□ -0.44
UBR4-203ENST00000375225 AMHP03971 560 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 YWHAQP27348 245 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 SLC1A2P43004 574 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 MAPKAPK2P49137 400 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 YBEYP58557 167 aaPredicted RBP12.33□□□□□ -0.44
UBR4-203ENST00000375225 SLC25A3Q00325 362 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 TNK2Q07912 1038 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 IL10RBQ08334 325 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 ITKQ08881 620 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 DLG2Q15700 870 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 ARL13AQ5H913 290 aaPredicted RBP12.33□□□□□ -0.44
UBR4-203ENST00000375225 TSTD2Q5T7W7 516 aa12.33□□□□□ -0.44
UBR4-203ENST00000375225 ZNF470Q6ECI4 717 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms