RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 ZNF624Q9P2J8 865 aaPredicted RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 NDUFAF1Q9Y375 327 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 A0A1W2PRG6 482 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 SMIM22K7EJ46 135 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 GUCY1B2O75343 617 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 GSTM1P09488 218 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 S100A1P23297 94 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 BDNFP23560 247 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 RPL9P32969 192 aaKnown RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 RFX4Q33E94 735 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 FUT11Q495W5 492 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 KIAA0319Q5VV43 1072 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 KLHL35Q6PF15 583 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 AMIGO3Q86WK7 504 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 RASGRP3Q8IV61 690 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 GPR135Q8IZ08 494 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 TMEM132CQ8N3T6 1108 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CAMKK1Q8N5S9 505 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 MYDGFQ969H8 173 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 APOPT1Q96IL0 206 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 QRFPRQ96P65 431 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 NMRAL1Q9HBL8 299 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 FKBP14Q9NWM8 211 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CHORDC1Q9UHD1 332 aaPredicted RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CCDC182A6NF36 153 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 IL12AP29459 219 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 SMIM11AP58511 58 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 KCNMA1Q12791 1236 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 PWP1Q13610 501 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 TFDP3Q5H9I0 405 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 MTDHQ86UE4 582 aaKnown RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CMTR2Q8IYT2 770 aaKnown RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 DEPDC4Q8N2C3 294 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 UBASH3BQ8TF42 649 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 PCDH9Q9HC56 1237 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 MCM8Q9UJA3 840 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CEP350Q5VT06 3117 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 TRIM43BA6NCK2 446 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 H0Y858 1186 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 IDH3BO43837 385 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 VDRP11473 427 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CYP2A7P20853 494 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 S100GP29377 79 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 ERFP50548 548 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 SMARCB1Q12824 385 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 PCSK7Q16549 785 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 AMZ1Q400G9 498 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 C5orf22Q49AR2 442 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 TMEM63BQ5T3F8 832 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 SCARA3Q6AZY7 606 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 LRRC74BQ6ZQY2 392 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 OR6Y1Q8NGX8 325 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 SIPA1Q96FS4 1042 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 SMARCD1Q96GM5 515 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 OXNAD1Q96HP4 312 aaPredicted RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CAPN10Q9HC96 672 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CDH9Q9ULB4 789 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 PHF24Q9UPV7 400 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CORO2BQ9UQ03 480 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 LCA5LO95447 670 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 MLYCDO95822 493 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 GYPCP04921 128 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 ASGR2P07307 311 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 ATP6V1C1P21283 382 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 PTPN3P26045 913 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 SCNN1AP37088 669 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 BLKP51451 505 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 ARHGDIBP52566 201 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 BCAT1P54687 386 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 SEMG2Q02383 582 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 C16orf46Q6P387 395 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 SYTL1Q8IYJ3 562 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 DEFB107AQ8IZN7 70 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CELF5Q8N6W0 485 aaKnown RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 SLC30A5Q8TAD4 765 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 BPIFB1Q8TDL5 484 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 CNPPD1Q9BV87 410 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 ZCCHC2Q9C0B9 1178 aaKnown RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 ROGDIQ9GZN7 287 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 KCTD10Q9H3F6 313 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 WDCPQ9H6R7 721 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 EPB41L4AQ9HCS5 686 aaPredicted RBP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 MIEF1Q9NQG6 463 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.35□□□□□ -1.39
PTPN3-202ENST00000374541 UBP1Q9NZI7 540 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 SIRPGQ9P1W8 387 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 EDARQ9UNE0 448 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 HES2Q9Y543 173 aa6.35□□□□□ -1.39
PTPN3-202ENST00000374541 COL1A2P08123 1366 aa6.34□□□□□ -1.39
PTPN3-202ENST00000374541 ZNF609O15014 1411 aa6.34□□□□□ -1.39
PTPN3-202ENST00000374541 A0A088AWK7 358 aa6.34□□□□□ -1.39
PTPN3-202ENST00000374541 SLC38A8A6NNN8 435 aa6.34□□□□□ -1.39
PTPN3-202ENST00000374541 MRASO14807 208 aa6.34□□□□□ -1.39
PTPN3-202ENST00000374541 IGSF6O95976 241 aa6.34□□□□□ -1.39
PTPN3-202ENST00000374541 CCDC166P0CW27 439 aa6.34□□□□□ -1.39
PTPN3-202ENST00000374541 HOXB2P14652 356 aa6.34□□□□□ -1.39
PTPN3-202ENST00000374541 ZNF10P21506 573 aaPredicted RBP6.34□□□□□ -1.39
PTPN3-202ENST00000374541 MPP3Q13368 585 aa6.34□□□□□ -1.39
PTPN3-202ENST00000374541 GALNTL6Q49A17 601 aa6.34□□□□□ -1.39
PTPN3-202ENST00000374541 Q4G0T1 1027 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms