RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 ZFYVE19Q96K21 471 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 RANBP9Q96S59 729 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 TDRD1Q9BXT4 1180 aaKnown RBP15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 STMN4Q9H169 189 aaPredicted RBP15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 TTYH1Q9H313 450 aaPredicted RBP15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 SCUBE2Q9NQ36 999 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 DUS2Q9NX74 493 aaKnown RBP15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 GDE1Q9NZC3 331 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 SLC2A6Q9UGQ3 507 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 ZNF180Q9UJW8 692 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 GGA2Q9UJY4 613 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 CXorf51AA0A1B0GTR3 108 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 SLC9A3R1O14745 358 aaPredicted RBP15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 PRKCGP05129 697 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 PDHA1P08559 390 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 CISD3P0C7P0 127 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 ADRA1DP25100 572 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 LTBRP36941 435 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 ARCN1P48444 511 aaKnown RBP15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 STK19P49842 368 aaPredicted RBP15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 TRAF2Q12933 501 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 GALNT3Q14435 633 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 DGKKQ5KSL6 1271 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 TANGO2Q6ICL3 276 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 RETSATQ6NUM9 610 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 ESRP1Q6NXG1 681 aaKnown RBP15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 ZNF449Q6P9G9 518 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 SH2D5Q6ZV89 423 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 C12orf40Q86WS4 652 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 CTAGE3PQ8IX95 158 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 SRRM1Q8IYB3 904 aaKnown RBP15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 BPIFB1Q8TDL5 484 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 SMIM14Q96QK8 99 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 MYADMQ96S97 322 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 PCDHGC4Q9Y5F7 938 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 ACTL7BQ9Y614 415 aa15.85■□□□□ 0.13
NIPAL3-204ENST00000374399 BRWD1Q9NSI6 2320 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 MROH6A6NGR9 719 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 HEPACAM2A8MVW5 462 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 PABPC1P11940 636 aaKnown RBP15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 SRCP12931 536 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 ARSAP15289 507 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 CES1P23141 567 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 RHOAP61586 193 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 MGAT5Q09328 741 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 TEDDM1Q5T9Z0 273 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 NAT16Q8N8M0 369 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 PTCD2Q8WV60 388 aaKnown RBP15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 MYLIPQ8WY64 445 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 RPL10LQ96L21 214 aaKnown RBP15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 FAM83CQ9BQN1 747 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 MCMBPQ9BTE3 642 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 CHKBQ9Y259 395 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 HS3ST2Q9Y278 367 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 RAI2Q9Y5P3 530 aa15.84■□□□□ 0.13
NIPAL3-204ENST00000374399 LDB2O43679 373 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 FZD6O60353 706 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 NDST3O95803 873 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 FGF1P05230 155 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 INHBAP08476 426 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 F7P08709 466 aaPredicted RBP15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 HOXB8P17481 243 aaPredicted RBP15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 HLA-DPA1P20036 260 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 ATP5DP30049 168 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 GUCY1A3Q02108 690 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 MESP2Q0VG99 397 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 ADGRE1Q14246 886 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 GEN1Q17RS7 908 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 PPHLN1Q8NEY8 458 aaKnown RBP15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 IFT43Q96FT9 208 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 SERAC1Q96JX3 654 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 AGAP2Q99490 1192 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 PLA2G2FQ9BZM2 168 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 TM6SF2Q9BZW4 377 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 OBP2AQ9NY56 170 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 LMCD1Q9NZU5 365 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 CDH7Q9ULB5 785 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 KCTD3Q9Y597 815 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 SPO11Q9Y5K1 396 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 MTCH2Q9Y6C9 303 aa15.83■□□□□ 0.13
NIPAL3-204ENST00000374399 GOLGA8TH3BQL2 631 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 HOXC11O43248 304 aaPredicted RBP15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 SHOX2O60902 331 aaPredicted RBP15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 SLC20A2Q08357 652 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 NR1H3Q13133 447 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 GRIN2CQ14957 1233 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 COL19A1Q14993 1142 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 TERF2Q15554 542 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 CNGA3Q16281 694 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 HSP90AA5PQ58FG0 334 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 ARMC3Q5W041 872 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 TTC19Q6DKK2 380 aaPredicted RBP15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 VITQ6UXI7 678 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 PACS1Q6VY07 963 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 SRLQ86TD4 932 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 ETFBKMTQ8IXQ9 262 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 OR13J1Q8NGT2 312 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 TRABDQ9H4I3 376 aa15.82■□□□□ 0.12
NIPAL3-204ENST00000374399 EBF3Q9H4W6 596 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms