RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 CSKP41240 450 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 CCR3P51677 355 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 MORF4L2Q15014 288 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 SMTNL2Q2TAL5 461 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 PLEKHG6Q3KR16 790 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 SLC45A4Q5BKX6 768 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 PITRM1Q5JRX3 1037 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 KCNT1Q5JUK3 1230 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 LRRC38Q5VT99 294 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 TRMT11Q7Z4G4 463 aaKnown RBP20.78■□□□□ 0.92
SYNC-201ENST00000373484 KIF2BQ8N4N8 673 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 TTC17Q96AE7 1141 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 KCTD15Q96SI1 283 aaPredicted RBP20.78■□□□□ 0.92
SYNC-201ENST00000373484 TMEM248Q9NWD8 314 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 MMP17Q9ULZ9 603 aa20.78■□□□□ 0.92
SYNC-201ENST00000373484 NUP205Q92621 2012 aa20.77■□□□□ 0.92
SYNC-201ENST00000373484 EXOC1LA0A1B0GW35 172 aa20.77■□□□□ 0.92
SYNC-201ENST00000373484 DNALI1O14645 258 aaPredicted RBP20.77■□□□□ 0.92
SYNC-201ENST00000373484 SMNDC1O75940 238 aaKnown RBP eCLIP20.77■□□□□ 0.92
SYNC-201ENST00000373484 KLF8O95600 359 aaPredicted RBP20.77■□□□□ 0.92
SYNC-201ENST00000373484 MZF1P28698 734 aaPredicted RBP20.77■□□□□ 0.92
SYNC-201ENST00000373484 OR1E1P30953 314 aa20.77■□□□□ 0.92
SYNC-201ENST00000373484 PLK1P53350 603 aa20.77■□□□□ 0.92
SYNC-201ENST00000373484 DPYSL2Q16555 572 aa20.77■□□□□ 0.92
SYNC-201ENST00000373484 HADHQ16836 314 aaKnown RBP20.77■□□□□ 0.92
SYNC-201ENST00000373484 SYT13Q7L8C5 426 aa20.77■□□□□ 0.92
SYNC-201ENST00000373484 VSIG1Q86XK7 387 aa20.77■□□□□ 0.92
SYNC-201ENST00000373484 RCOR2Q8IZ40 523 aa20.77■□□□□ 0.92
SYNC-201ENST00000373484 ALG14Q96F25 216 aa20.77■□□□□ 0.92
SYNC-201ENST00000373484 RBM41Q96IZ5 413 aaKnown RBP20.77■□□□□ 0.92
SYNC-201ENST00000373484 PRMT8Q9NR22 394 aaPredicted RBP20.77■□□□□ 0.92
SYNC-201ENST00000373484 THAP10Q9P2Z0 257 aaPredicted RBP20.77■□□□□ 0.92
SYNC-201ENST00000373484 LNPEPQ9UIQ6 1025 aa20.77■□□□□ 0.92
SYNC-201ENST00000373484 PHTF1Q9UMS5 762 aa20.77■□□□□ 0.92
SYNC-201ENST00000373484 R3HDM2Q9Y2K5 976 aaKnown RBP20.77■□□□□ 0.92
SYNC-201ENST00000373484 NYNRINQ9P2P1 1898 aaKnown RBP20.77■□□□□ 0.91
SYNC-201ENST00000373484 PPP1R12AO14974 1030 aaPredicted RBP20.76■□□□□ 0.91
SYNC-201ENST00000373484 NPC1O15118 1278 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 LAMTOR5O43504 91 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 PAPSS2O95340 614 aaPredicted RBP20.76■□□□□ 0.91
SYNC-201ENST00000373484 RHOCP08134 193 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 POLR2EP19388 210 aaKnown RBP20.76■□□□□ 0.91
SYNC-201ENST00000373484 EPHB2P29323 1055 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 SSR1P43307 286 aaKnown RBP20.76■□□□□ 0.91
SYNC-201ENST00000373484 CXCL12P48061 93 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 TAS2R40P59535 323 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 SATB1Q01826 763 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 MAML2Q8IZL2 1156 aaPredicted RBP20.76■□□□□ 0.91
SYNC-201ENST00000373484 APCDD1Q8J025 514 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 CCDC33Q8N5R6 958 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 TXNDC5Q8NBS9 432 aaKnown RBP20.76■□□□□ 0.91
SYNC-201ENST00000373484 SORCS1Q8WY21 1168 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 SMC6Q96SB8 1091 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 ACOX2Q99424 681 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 FEM1AQ9BSK4 669 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 MYLK2Q9H1R3 596 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 GGT7Q9UJ14 662 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 SHOC2Q9UQ13 582 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 STK38LQ9Y2H1 464 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 OR51B4Q9Y5P0 310 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 CCDC189A1A4V9 331 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 ALOX15BO15296 676 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 ADAM23O75077 832 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 ATP5BP06576 529 aaKnown RBP20.76■□□□□ 0.91
SYNC-201ENST00000373484 MAPKAPK2P49137 400 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 ZNF135P52742 658 aaPredicted RBP20.76■□□□□ 0.91
SYNC-201ENST00000373484 TPI1P60174 286 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 PPP6R3Q5H9R7 873 aaPredicted RBP20.76■□□□□ 0.91
SYNC-201ENST00000373484 HSPH1Q92598 858 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 PRCCQ92733 491 aaPredicted RBP20.76■□□□□ 0.91
SYNC-201ENST00000373484 UTP4Q969X6 686 aaKnown RBP20.76■□□□□ 0.91
SYNC-201ENST00000373484 HERPUD2Q9BSE4 406 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 TRABDQ9H4I3 376 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.76■□□□□ 0.91
SYNC-201ENST00000373484 NDFIP2Q9NV92 336 aa20.76■□□□□ 0.91
SYNC-201ENST00000373484 SGK1O00141 431 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 EEF2KO00418 725 aaKnown RBP20.75■□□□□ 0.91
SYNC-201ENST00000373484 FGF10O15520 208 aaPredicted RBP20.75■□□□□ 0.91
SYNC-201ENST00000373484 ZWINTO95229 277 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 DLDP09622 509 aaKnown RBP20.75■□□□□ 0.91
SYNC-201ENST00000373484 NTSR1P30989 418 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 GCKP35557 465 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 ENPP2Q13822 863 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 ZNF234Q14588 700 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 PTPRNQ16849 979 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 EOGTQ5NDL2 527 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 RNF219Q5W0B1 726 aaPredicted RBP20.75■□□□□ 0.91
SYNC-201ENST00000373484 ZNF783Q6ZMS7 281 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 CHPFQ8IZ52 775 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 RTL3Q8N8U3 475 aaKnown RBP20.75■□□□□ 0.91
SYNC-201ENST00000373484 LRRC8CQ8TDW0 803 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 CYB5D2Q8WUJ1 264 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 PRRX2Q99811 253 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 CATSPERBQ9H7T0 1116 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 POLR3BQ9NW08 1133 aaPredicted RBP20.75■□□□□ 0.91
SYNC-201ENST00000373484 CHKBQ9Y259 395 aa20.75■□□□□ 0.91
SYNC-201ENST00000373484 FANCMQ8IYD8 2048 aa20.74■□□□□ 0.91
SYNC-201ENST00000373484 ILVBLA1L0T0 632 aa20.74■□□□□ 0.91
SYNC-201ENST00000373484 WASH4PA8MWX3 477 aa20.74■□□□□ 0.91
SYNC-201ENST00000373484 ASLP04424 464 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms