RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ILKAPQ9H0C8 392 aaPredicted RBP5.48□□□□□ -1.53
ATG4A-204ENST00000372246 ITM2CQ9NQX7 267 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 XPR1Q9UBH6 696 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 CACNG4Q9UBN1 327 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 HESX1Q9UBX0 185 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 DCDC2Q9UHG0 476 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 NUDT5Q9UKK9 219 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 TMA7Q9Y2S6 64 aaKnown RBP5.48□□□□□ -1.53
ATG4A-204ENST00000372246 TSC22D4Q9Y3Q8 395 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 STYXL1Q9Y6J8 313 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 A0A1W2PQ67 120 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 BTBD19C9JJ37 291 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 EI24O14681 340 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 HDAC3O15379 428 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 KPNA6O60684 536 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 SPAG6O75602 509 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 PCNAP12004 261 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 ITGB6P18564 788 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 GRK2P25098 689 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 SFNP31947 248 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 RPL14P50914 215 aaKnown RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 IST1P53990 364 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 CDH13P55290 713 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 SNRPFP62306 86 aaKnown RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 IFITM3Q01628 133 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 CLCQ05315 142 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 NSUN2Q08J23 767 aaKnown RBP eCLIP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 TFDP2Q14188 446 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 SF3B4Q15427 424 aaKnown RBP eCLIP5.47□□□□□ -1.532e-6■■■■■ 28.8
ATG4A-204ENST00000372246 ZNF667Q5HYK9 610 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 REP15Q6BDI9 236 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 ZNF787Q6DD87 383 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 KCTD8Q6ZWB6 473 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 PODNQ7Z5L7 613 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 TMEM110Q86TL2 294 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 WDR49Q8IV35 697 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 HS3ST5Q8IZT8 346 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 PGAM4Q8N0Y7 254 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 HTR3CQ8WXA8 447 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 COX4I2Q96KJ9 171 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 C3orf30Q96M34 536 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 TBCBQ99426 244 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 MPHOSPH6Q99547 160 aaKnown RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 SERPINI1Q99574 410 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 IL12RB2Q99665 862 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 MRPL45Q9BRJ2 306 aaKnown RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 ALOXE3Q9BYJ1 711 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 PRDM12Q9H4Q4 367 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 CLK4Q9HAZ1 481 aaKnown RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 SLC38A10Q9HBR0 1119 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 ZBTB26Q9HCK0 441 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 ZNF302Q9NR11 478 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 MKS1Q9NXB0 559 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 GGA3Q9NZ52 723 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 SLC2A6Q9UGQ3 507 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 DSEQ9UL01 958 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 GINS2Q9Y248 185 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 CDY2AQ9Y6F7 541 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 CDY1Q9Y6F8 540 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 RNF103-CHMP3A0A140T963 221 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 BCLAF3A2AJT9 711 aaKnown RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 I6L893 689 aaPredicted RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 PARNO95453 639 aaKnown RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 ALDH1A1P00352 501 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 PGK1P00558 417 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 PRKCBP05771 671 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 SUPT20HL2P0C7V6 817 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 MCF2P10911 925 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 IL7RP16871 459 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 TGM2P21980 687 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 EEF1B2P24534 225 aaKnown RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 SDC4P31431 198 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 ARL2P36404 184 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 CASP2P42575 452 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 NDUFV1P49821 464 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 LAMTOR4Q0VGL1 99 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 BFSP2Q13515 415 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 AAK1Q2M2I8 961 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 USP41Q3LFD5 358 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 SUPT20HL1Q3ZLR7 823 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 VPS26BQ4G0F5 336 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 C4orf48Q5BLP8 95 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 TIFABQ6ZNK6 161 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 IGFN1Q86VF2 1251 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 CMTR2Q8IYT2 770 aaKnown RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 TXNDC5Q8NBS9 432 aaKnown RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 SPATA22Q8NHS9 363 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 MAGEE2Q8TD90 523 aaPredicted RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 DDI1Q8WTU0 396 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 COPS5Q92905 334 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 CELF6Q96J87 481 aaKnown RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 VPS39Q96JC1 886 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 SEPHS2Q99611 448 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 DGCR6LQ9BY27 220 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 NACA2Q9H009 215 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 STN1Q9H668 368 aaKnown RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 DHX33Q9H6R0 707 aaKnown RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 FANCEQ9HB96 536 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 CHST12Q9NRB3 414 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms