RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 SLC7A4O43246 635 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 KRT86O43790 486 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 RNGTTO60942 597 aaKnown RBP12.72□□□□□ -0.37
SNCG-202ENST00000372017 LRP3O75074 770 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 PRKCGP05129 697 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 HLA-DQB2P05538 268 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 TBC1D3HP0C7X1 549 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 MAT2AP31153 395 aaKnown RBP12.72□□□□□ -0.37
SNCG-202ENST00000372017 MMP13P45452 471 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 SCNN1BP51168 640 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 NEK3P51956 506 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 RWDD2BP57060 319 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 BNC1Q01954 994 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 SEMG2Q02383 582 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 NIPAL4Q0D2K0 466 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 SFSWAPQ12872 951 aaKnown RBP12.72□□□□□ -0.37
SNCG-202ENST00000372017 ZNF235Q14590 738 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 ODF2Q5BJF6 829 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 MARC1Q5VT66 337 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 SEL1L3Q68CR1 1132 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 TBC1D3GQ6DHY5 549 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 TBC1D3CQ6IPX1 549 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 LAYNQ6UX15 382 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 PRR23CQ6ZRP0 262 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 BBS12Q6ZW61 710 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 TBC1D3Q8IZP1 549 aaPredicted RBP12.72□□□□□ -0.37
SNCG-202ENST00000372017 TXLNBQ8N3L3 684 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 ZCCHC9Q8N567 271 aaKnown RBP12.72□□□□□ -0.37
SNCG-202ENST00000372017 CCNYQ8ND76 341 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 ARRDC2Q8TBH0 407 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 SNX19Q92543 992 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 KLK6Q92876 244 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 FATE1Q969F0 183 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 RBM41Q96IZ5 413 aaKnown RBP12.72□□□□□ -0.37
SNCG-202ENST00000372017 NUDCD1Q96RS6 583 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 IL12RB2Q99665 862 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 OSBPL1AQ9BXW6 950 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 OSBPL8Q9BZF1 889 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 TSGA10Q9BZW7 698 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 MIR1-1HGQ9H1L0 117 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 PCED1AQ9H1Q7 454 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 C10orf88Q9H8K7 445 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 CAPN10Q9HC96 672 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 DYRK4Q9NR20 520 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 VPS45Q9NRW7 570 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 RBM22Q9NW64 420 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNCG-202ENST00000372017 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNCG-202ENST00000372017 PCDHGC4Q9Y5F7 938 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 CACNA1BQ00975 2339 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 TMEM131Q92545 1883 aa12.72□□□□□ -0.37
SNCG-202ENST00000372017 A0A1W2PPC4 97 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 A0A1W2PQU0 124 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 TCRBV7S2A1N4TA0A589 114 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 LNP1A1A4G5 178 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 LRRC72A6NJI9 287 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 AREL1O15033 823 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 LATO43561 262 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 JCHAINP01591 159 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 WNT1P04628 370 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 CCNB1P14635 433 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 ZFXP17010 805 aaPredicted RBP12.71□□□□□ -0.37
SNCG-202ENST00000372017 TGM2P21980 687 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 PTPN7P35236 360 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 CCR5P51681 352 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 COPS2P61201 443 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 DSC2Q02487 901 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 AP1B1Q10567 949 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 TRAF2Q12933 501 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 TFDP2Q14188 446 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 FGL2Q14314 439 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 PRKD1Q15139 912 aaPredicted RBP12.71□□□□□ -0.37
SNCG-202ENST00000372017 PTPRRQ15256 657 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 TRIM61Q5EBN2 209 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 WDR45BQ5MNZ6 344 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 SYCP2LQ5T4T6 812 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 MEI1Q5TIA1 1274 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 ALG1LQ6GMV1 187 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 FBXL19Q6PCT2 694 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 SLC23A3Q6PIS1 610 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 SYCE1Q8N0S2 351 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNCG-202ENST00000372017 ECHDC3Q96DC8 303 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 PPP1R16AQ96I34 528 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 SLC6A18Q96N87 628 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 SMIM14Q96QK8 99 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 FAM118BQ9BPY3 351 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 KDM4CQ9H3R0 1056 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 TM9SF3Q9HD45 589 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 DLL3Q9NYJ7 618 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 DKK3Q9UBP4 350 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 ATP8A1Q9Y2Q0 1164 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 NCOR2Q9Y618 2525 aa12.71□□□□□ -0.37
SNCG-202ENST00000372017 HTRA2O43464 458 aaPredicted RBP12.7□□□□□ -0.38
SNCG-202ENST00000372017 AP1G1O43747 822 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 MMP2P08253 660 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 MX2P20592 715 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 CD27P26842 260 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 RENBPP51606 427 aa12.7□□□□□ -0.38
SNCG-202ENST00000372017 IFI35P80217 286 aaPredicted RBP12.7□□□□□ -0.38
SNCG-202ENST00000372017 RAD51Q06609 339 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms