RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 PDE4DIPQ5VU43 2346 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 EPOPA6NHQ4 379 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SLC38A8A6NNN8 435 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 NUDT19A8MXV4 375 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 ZNF185O15231 689 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 KDM1AO60341 852 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 TUSC2O75896 110 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 URI1O94763 535 aaPredicted RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 CSPG5O95196 566 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 HRGP04196 525 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 RB1P06400 928 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 ATF2P15336 505 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 PDGFRAP16234 1089 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 AGXTP21549 392 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 GPD1P21695 349 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 PSMA2P25787 234 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 CTNNA2P26232 953 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 CXCR5P32302 372 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 CHKAP35790 457 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 PIK3CBP42338 1070 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 RGS19P49795 217 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 DNA2P51530 1060 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SLC5A3P53794 718 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SNX16P57768 344 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 YWHAZP63104 245 aaKnown RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 SMARCB1Q12824 385 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 RPS6KA1Q15418 735 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 C15orf59Q2T9L4 293 aaPredicted RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 MGAT5BQ3V5L5 792 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 EFHC1Q5JVL4 640 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 DNTTIP2Q5QJE6 756 aaKnown RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 DCAF12L1Q5VU92 463 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 OTUD1Q5VV17 481 aaPredicted RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 PLPP4Q5VZY2 271 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 TPGS2Q68CL5 300 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 AADACL2Q6P093 401 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 CC2D1AQ6P1N0 951 aaPredicted RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 CYP4V2Q6ZWL3 525 aaPredicted RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 GPR155Q7Z3F1 870 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SYCE1Q8N0S2 351 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SIX6OS1Q8N1H7 587 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SCML4Q8N228 414 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 KIAA1958Q8N8K9 716 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 NIPA2Q8N8Q9 360 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SPPL2BQ8TCT7 592 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 FNIP1Q8TF40 1166 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 C2orf15Q8WU43 125 aaKnown RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 CENPIQ92674 756 aaPredicted RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 MPP4Q96JB8 637 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SPATA17Q96L03 361 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 CFAP57Q96MR6 1250 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 TGS1Q96RS0 853 aaKnown RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 OSBPL9Q96SU4 736 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 PSMB7Q99436 277 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 KCNJ15Q99712 375 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SEPT5Q99719 369 aaPredicted RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 CNPY3Q9BT09 278 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 C11orf84Q9BUA3 381 aaPredicted RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 PRO3102Q9H379 93 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 NMUR1Q9HB89 426 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 PNPLA8Q9NP80 782 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 CNGB3Q9NQW8 809 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 ASNSD1Q9NWL6 643 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 OSER1Q9NX31 292 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 DNAJC28Q9NX36 388 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SMARCAL1Q9NZC9 954 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 EHD2Q9NZN4 543 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SNX12Q9UMY4 172 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 NAALADL1Q9UQQ1 740 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 IRAK3Q9Y616 596 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 PATJQ8NI35 1801 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 GREB1Q4ZG55 1949 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 FAM92AA1XBS5 289 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 H3BNC9 293 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 ZNF561-AS1K7EIQ3 104 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 RFXAPO00287 272 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SPOPO43791 374 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 HSF2BPO75031 334 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 LRCH4O75427 683 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 DAB1O75553 588 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 TRUB2O95900 331 aaKnown RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 PRLRP16471 622 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 HMGA1P17096 107 aaKnown RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 IL1R2P27930 398 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 MATKP42679 507 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 SLC1A1P43005 524 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 PTPN9P43378 593 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 MTNR1BP49286 362 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 ATXN1P54253 815 aaKnown RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 RPL10AP62906 217 aaKnown RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 CYP4F8P98187 520 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 POU4F1Q01851 419 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 GPM6BQ13491 265 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 PIGHQ14442 188 aaPredicted RBP3.67□□□□□ -1.82
MCF2-202ENST00000370573 TOR2AQ5JU69 321 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 BSPRYQ5W0U4 402 aa3.67□□□□□ -1.82
MCF2-202ENST00000370573 LCNL1Q6ZST4 164 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms