RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 TNFSF13BQ9Y275 285 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 TBC1D30Q9Y2I9 924 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 SLURP2P0DP57 97 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 SLC26A3P40879 764 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 PPIL2Q13356 520 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 GALNT18Q6P9A2 607 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 XYLT1Q86Y38 959 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 DNAJC1Q96KC8 554 aaKnown RBP16.04■□□□□ 0.16
COL17A1-202ENST00000369733 H0YGN5 161 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 CD86P42081 329 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 PARK7Q99497 189 aaKnown RBP16.04■□□□□ 0.16
COL17A1-202ENST00000369733 RHOJQ9H4E5 214 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 CIDEBQ9UHD4 219 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 DOLKQ9UPQ8 538 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 NFS1Q9Y697 457 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 RGL2O15211 777 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 ITGA7Q13683 1181 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 PHKG1Q16816 387 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 STXBP5Q5T5C0 1151 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 NBPF12Q5TAG4 269 aaPredicted RBP16.04■□□□□ 0.16
COL17A1-202ENST00000369733 NKAPQ8N5F7 415 aaKnown RBP16.04■□□□□ 0.16
COL17A1-202ENST00000369733 CNTD1Q8N815 330 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 LRTOMTQ8WZ04 291 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 SPATC1LQ9H0A9 340 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 C8orf4Q9NR00 106 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 TUBA8Q9NY65 449 aaPredicted RBP16.04■□□□□ 0.16
COL17A1-202ENST00000369733 G3V2T6 193 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 SNHG28P0DPA3 235 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 PRKG2Q13237 762 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 LRP10Q7Z4F1 713 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 REXO5Q96IC2 774 aaKnown RBP16.04■□□□□ 0.16
COL17A1-202ENST00000369733 CPXM1Q96SM3 734 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 SENP6Q9GZR1 1112 aaPredicted RBP16.04■□□□□ 0.16
COL17A1-202ENST00000369733 MROH8Q9H579 483 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 FETUBQ9UGM5 382 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 FBXO5Q9UKT4 447 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 IKZF3Q9UKT9 509 aa16.04■□□□□ 0.16
COL17A1-202ENST00000369733 FGF10O15520 208 aaPredicted RBP16.03■□□□□ 0.16
COL17A1-202ENST00000369733 LYPLA2O95372 231 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 COL5A2P05997 1499 aaPredicted RBP16.03■□□□□ 0.16
COL17A1-202ENST00000369733 GNASQ5JWF2 1037 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 DENND5AQ6IQ26 1287 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 HIPK1Q86Z02 1210 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 SYT12Q8IV01 421 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 PLD5Q8N7P1 536 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 C12orf29Q8N999 325 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 OR52K2Q8NGK3 314 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 WDR36Q8NI36 951 aaKnown RBP16.03■□□□□ 0.16
COL17A1-202ENST00000369733 NKX2-3Q8TAU0 364 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 CDT1Q9H211 546 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 SLC7A8Q9UHI5 535 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 CCDC182A6NF36 153 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 ADAMTS3O15072 1205 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 CCR3P51677 355 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 CAMK2GQ13555 558 aaPredicted RBP16.03■□□□□ 0.16
COL17A1-202ENST00000369733 ADGRE1Q14246 886 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 DACT2Q5SW24 774 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 CERCAMQ5T4B2 595 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 DRICH1Q6PGQ1 229 aaPredicted RBP16.03■□□□□ 0.16
COL17A1-202ENST00000369733 CRTC3Q6UUV7 619 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.03■□□□□ 0.16
COL17A1-202ENST00000369733 CPNE8Q86YQ8 564 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 BUD23O43709 281 aaKnown RBP16.03■□□□□ 0.16
COL17A1-202ENST00000369733 PLIN3O60664 434 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 CYP2A7P20853 494 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 UBA1P22314 1058 aaKnown RBP16.03■□□□□ 0.16
COL17A1-202ENST00000369733 PROX1Q92786 737 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 POLR1EQ9GZS1 481 aaKnown RBP16.03■□□□□ 0.16
COL17A1-202ENST00000369733 DNAJB4Q9UDY4 337 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 DGKBQ9Y6T7 804 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 BCLAF3A2AJT9 711 aaKnown RBP16.03■□□□□ 0.16
COL17A1-202ENST00000369733 C4BPAP04003 597 aaKnown RBP16.03■□□□□ 0.16
COL17A1-202ENST00000369733 CD48P09326 243 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 EPB42P16452 691 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 ERCC2P18074 760 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 PBLDP30039 288 aaPredicted RBP16.03■□□□□ 0.16
COL17A1-202ENST00000369733 THPOP40225 353 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 OVOS1Q6IE37 1185 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 ANKRD52Q8NB46 1076 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 ATP6V1HQ9UI12 483 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 RPS6KA6Q9UK32 745 aa16.03■□□□□ 0.16
COL17A1-202ENST00000369733 MAFO75444 373 aaPredicted RBP16.02■□□□□ 0.16
COL17A1-202ENST00000369733 NPR3P17342 541 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 PTPN1P18031 435 aaKnown RBP16.02■□□□□ 0.16
COL17A1-202ENST00000369733 CDC42P60953 191 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 CTXN3Q4LDR2 81 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 LDLRAP1Q5SW96 308 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 PAGE2Q7Z2X7 111 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 UBR7Q8N806 425 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 ZNF781Q8N8C0 355 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 CDYL2Q8N8U2 506 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 SLC47A1Q96FL8 570 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 MED8Q96G25 268 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 CXorf21Q9HAI6 301 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 COX7A2P14406 83 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 TRIM71Q2Q1W2 868 aaKnown RBP16.02■□□□□ 0.16
COL17A1-202ENST00000369733 RFX4Q33E94 735 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 MZT2BQ6NZ67 158 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 RNF19BQ6ZMZ0 732 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 PIGZQ86VD9 579 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms