RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 TM6SF2Q9BZW4 377 aa16.97■□□□□ 0.31
PHGDH-202ENST00000369409 INTS9Q9NV88 658 aaKnown RBP16.97■□□□□ 0.31
PHGDH-202ENST00000369409 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-202ENST00000369409 TNRC18O15417 2968 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-202ENST00000369409 DOCK8Q8NF50 2099 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 BPTFQ12830 3046 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 GOLGA8TH3BQL2 631 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 SLC9A3R1O14745 358 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-202ENST00000369409 SMAD6O43541 496 aaKnown RBP16.96■□□□□ 0.31
PHGDH-202ENST00000369409 KRT38O76015 456 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 NDST3O95803 873 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 MT-ND3P03897 115 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 PRKCGP05129 697 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 F7P08709 466 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-202ENST00000369409 LSP1P33241 339 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 SERPINB9P50453 376 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 MSLNQ13421 630 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-202ENST00000369409 SLC12A1Q13621 1099 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 FAM78AQ5JUQ0 283 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 ATXN7L2Q5T6C5 722 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-202ENST00000369409 GPR149Q86SP6 731 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 ATXN2LQ8WWM7 1075 aaKnown RBP16.96■□□□□ 0.31
PHGDH-202ENST00000369409 FGF13Q92913 245 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 SERAC1Q96JX3 654 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 RANBP9Q96S59 729 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 AGAP2Q99490 1192 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 TDRD1Q9BXT4 1180 aaKnown RBP16.96■□□□□ 0.31
PHGDH-202ENST00000369409 MLXIPLQ9NP71 852 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 TXNDC16Q9P2K2 825 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 CHKBQ9Y259 395 aa16.96■□□□□ 0.31
PHGDH-202ENST00000369409 FAM47DPA6NHR8 397 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 A6NNZ2 444 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 EPOP01588 193 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 CES1P23141 567 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 GBP2P32456 591 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-202ENST00000369409 BMP8BP34820 402 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 CTSOP43234 321 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-202ENST00000369409 PLK1P53350 603 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 LRRC14Q15048 493 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 TUBB8Q3ZCM7 444 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 LGSNQ5TDP6 509 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 MROH9Q5TGP6 573 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 PDPK2PQ6A1A2 396 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 ADGRG2Q8IZP9 1017 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 ASB16Q96NS5 453 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 IARS2Q9NSE4 1012 aaKnown RBP16.95■□□□□ 0.3
PHGDH-202ENST00000369409 TREX1Q9NSU2 369 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 GGA2Q9UJY4 613 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 PCDHGC4Q9Y5F7 938 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 C5orf42Q9H799 3197 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 HMX2A2RU54 273 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 PRPF4O43172 522 aaKnown RBP eCLIP16.95■□□□□ 0.33e-6■■■■□ 19.9
PHGDH-202ENST00000369409 PIRTP0C851 137 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 WEE1P30291 646 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 STK19P49842 368 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-202ENST00000369409 TRAF2Q12933 501 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 CNGA3Q16281 694 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 TEDDM1Q5T9Z0 273 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 TRIM68Q6AZZ1 485 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 NCEH1Q6PIU2 408 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 EFHBQ8N7U6 833 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 BLOC1S5Q8TDH9 187 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 ATP2A3Q93084 1043 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 MTBPQ96DY7 904 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 RPL10LQ96L21 214 aaKnown RBP16.95■□□□□ 0.3
PHGDH-202ENST00000369409 CPNE1Q99829 537 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 DUS2Q9NX74 493 aaKnown RBP16.95■□□□□ 0.3
PHGDH-202ENST00000369409 NKIRAS1Q9NYS0 192 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 MARK1Q9P0L2 795 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 SMG5Q9UPR3 1016 aaKnown RBP16.95■□□□□ 0.3
PHGDH-202ENST00000369409 RAI2Q9Y5P3 530 aa16.95■□□□□ 0.3
PHGDH-202ENST00000369409 COL4A3Q01955 1670 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 TYROBPO43914 113 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 VAPBO95292 243 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 CYP17A1P05093 508 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 PABPC1P11940 636 aaKnown RBP16.94■□□□□ 0.3
PHGDH-202ENST00000369409 PAMP19021 973 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 CA4P22748 312 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 CNTFP26441 200 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 ARNTP27540 789 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 GP5P40197 560 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 NSUN2Q08J23 767 aaKnown RBP eCLIP16.94■□□□□ 0.3
PHGDH-202ENST00000369409 TSTD2Q5T7W7 516 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 KIAA0930Q6ICG6 404 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-202ENST00000369409 ANKRD54Q6NXT1 300 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 SYCE2Q6PIF2 218 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 TMEM184AQ6ZMB5 413 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 NAT16Q8N8M0 369 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 LPCAT1Q8NF37 534 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 ST13P5Q8NFI4 369 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-202ENST00000369409 OR6K2Q8NGY2 324 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 PDCD6IPQ8WUM4 868 aaKnown RBP16.94■□□□□ 0.3
PHGDH-202ENST00000369409 SMARCD2Q92925 531 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 RMDN1Q96DB5 314 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 ASIC4Q96FT7 647 aa16.94■□□□□ 0.3
PHGDH-202ENST00000369409 DENND4AQ7Z401 1863 aa16.93■□□□□ 0.3
PHGDH-202ENST00000369409 PDHA1P08559 390 aa16.93■□□□□ 0.3
PHGDH-202ENST00000369409 PYGBP11216 843 aa16.93■□□□□ 0.3
PHGDH-202ENST00000369409 DHCR24Q15392 516 aa16.93■□□□□ 0.3
PHGDH-202ENST00000369409 ARMC3Q5W041 872 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms