RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 SLC9A4Q6AI14 798 aa10.16□□□□□ -0.78
TPM3-210ENST00000368530 BNIPLQ7Z465 357 aa10.16□□□□□ -0.78
TPM3-210ENST00000368530 CPXM2Q8N436 756 aa10.16□□□□□ -0.78
TPM3-210ENST00000368530 ZCCHC9Q8N567 271 aaKnown RBP10.16□□□□□ -0.78
TPM3-210ENST00000368530 NETO2Q8NC67 525 aa10.16□□□□□ -0.78
TPM3-210ENST00000368530 UHMK1Q8TAS1 419 aaKnown RBP10.16□□□□□ -0.78
TPM3-210ENST00000368530 FAM71BQ8TC56 605 aa10.16□□□□□ -0.78
TPM3-210ENST00000368530 DQX1Q8TE96 717 aaKnown RBP10.16□□□□□ -0.78
TPM3-210ENST00000368530 SORCS1Q8WY21 1168 aa10.16□□□□□ -0.78
TPM3-210ENST00000368530 FAF2Q96CS3 445 aa10.16□□□□□ -0.78
TPM3-210ENST00000368530 CSPG4P5Q96PW8 444 aa10.16□□□□□ -0.78
TPM3-210ENST00000368530 TXLNGYQ9BZA5 131 aa10.16□□□□□ -0.78
TPM3-210ENST00000368530 ETNK2Q9NVF9 386 aa10.16□□□□□ -0.78
TPM3-210ENST00000368530 VPS18Q9P253 973 aa10.16□□□□□ -0.78
TPM3-210ENST00000368530 FNDC3AQ9Y2H6 1198 aaKnown RBP10.16□□□□□ -0.78
TPM3-210ENST00000368530 ZNF510Q9Y2H8 683 aa10.16□□□□□ -0.78
TPM3-210ENST00000368530 SHROOM3Q8TF72 1996 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 H3BRJ5 948 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 EEF2KO00418 725 aaKnown RBP10.15□□□□□ -0.78
TPM3-210ENST00000368530 DNALI1O14645 258 aaPredicted RBP10.15□□□□□ -0.78
TPM3-210ENST00000368530 TP73O15350 636 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 TGM2P21980 687 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 OXTRP30559 389 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 GBE1Q04446 702 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 EFEMP1Q12805 493 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 HLA-BQ31612 363 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 SOWAHCQ53LP3 525 aaPredicted RBP10.15□□□□□ -0.78
TPM3-210ENST00000368530 CEP85LQ5SZL2 805 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 C19orf48Q6RUI8 117 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 KIAA0907Q7Z7F0 614 aaPredicted RBP10.15□□□□□ -0.78
TPM3-210ENST00000368530 DENND1CQ8IV53 801 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 IQCKQ8N0W5 287 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 GOLGA6L1Q8N7Z2 621 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 BBOF1Q8ND07 529 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 CCHCR1Q8TD31 782 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 RNF139Q8WU17 664 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 SIPA1Q96FS4 1042 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 SLC2A11Q9BYW1 496 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 TMEM245Q9H330 911 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 GAREM1Q9H706 876 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 PCDH9Q9HC56 1237 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 MED4Q9NPJ6 270 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 ANLNQ9NQW6 1124 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 EIF2B4Q9UI10 523 aaKnown RBP10.15□□□□□ -0.78
TPM3-210ENST00000368530 PCDHB9Q9Y5E1 797 aa10.15□□□□□ -0.78
TPM3-210ENST00000368530 FAM72CH0Y354 149 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 I6L893 689 aaPredicted RBP10.14□□□□□ -0.79
TPM3-210ENST00000368530 BCAT2O15382 392 aaPredicted RBP10.14□□□□□ -0.79
TPM3-210ENST00000368530 KCNN4O15554 427 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 MSI1O43347 362 aaKnown RBP10.14□□□□□ -0.79
TPM3-210ENST00000368530 OPA1O60313 960 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 HMBSP08397 361 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 ATXN1LP0C7T5 689 aaKnown RBP10.14□□□□□ -0.79
TPM3-210ENST00000368530 RPL22P35268 128 aaKnown RBP10.14□□□□□ -0.79
TPM3-210ENST00000368530 ADRA1BP35368 520 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 MLLT3P42568 568 aaPredicted RBP10.14□□□□□ -0.79
TPM3-210ENST00000368530 CAV1Q03135 178 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 CAMK2GQ13555 558 aaPredicted RBP10.14□□□□□ -0.79
TPM3-210ENST00000368530 STARD3Q14849 445 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 EIF4HQ15056 248 aaKnown RBP10.14□□□□□ -0.79
TPM3-210ENST00000368530 TRIP4Q15650 581 aaPredicted RBP10.14□□□□□ -0.79
TPM3-210ENST00000368530 FAM72AQ5TYM5 149 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 NCBP2-AS2Q69YL0 99 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 FAM72DQ6L9T8 149 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 TMPRSS7Q7RTY8 843 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 FAM72BQ86X60 149 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 VSIG1Q86XK7 387 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 SCML4Q8N228 414 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 MDM1Q8TC05 714 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 PRCCQ92733 491 aaPredicted RBP10.14□□□□□ -0.79
TPM3-210ENST00000368530 ARL8AQ96BM9 186 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 ORAI3Q9BRQ5 295 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 FAM129AQ9BZQ8 928 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 TKTL2Q9H0I9 626 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 MIR1-1HGQ9H1L0 117 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 WDCPQ9H6R7 721 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 TM7SF3Q9NS93 570 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 RRN3Q9NYV6 651 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 MARCH2Q9P0N8 246 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 SFMBT1Q9UHJ3 866 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 STOML2Q9UJZ1 356 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 TPX2Q9ULW0 747 aaKnown RBP10.14□□□□□ -0.79
TPM3-210ENST00000368530 APOBEC2Q9Y235 224 aaKnown RBP10.14□□□□□ -0.79
TPM3-210ENST00000368530 BTBD3Q9Y2F9 522 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 PCDHGB2Q9Y5G2 931 aa10.14□□□□□ -0.79
TPM3-210ENST00000368530 SMG1Q96Q15 3661 aaKnown RBP10.13□□□□□ -0.79
TPM3-210ENST00000368530 ADAMTS20P59510 1910 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 A0A1B0GVT2 93 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 MEI4A8MW99 385 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 ZNF487B1APH4 448 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 GOLGA8MH3BSY2 632 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 TIMM44O43615 452 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 MFSD11O43934 449 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 SYNCRIPO60506 623 aaKnown RBP10.13□□□□□ -0.79
TPM3-210ENST00000368530 F9P00740 461 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 NUDT7P0C024 238 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 HLA-EP13747 358 aa10.13□□□□□ -0.79
TPM3-210ENST00000368530 ZFXP17010 805 aaPredicted RBP10.13□□□□□ -0.79
TPM3-210ENST00000368530 HOXD9P28356 352 aaPredicted RBP10.13□□□□□ -0.79
TPM3-210ENST00000368530 RBL1P28749 1068 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms