RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CCDC173Q0VFZ6 552 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 PTK2BQ14289 1009 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 CDKN3Q16667 212 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 EFHC2Q5JST6 749 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 PPP1R15BQ5SWA1 713 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 MON1BQ7L1V2 547 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 SPACA3Q8IXA5 215 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 LSM14AQ8ND56 463 aaKnown RBP16.22■□□□□ 0.19
CKS1B-202ENST00000368436 ZNF248Q8NDW4 579 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 NEK11Q8NG66 645 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 MAPK15Q8TD08 544 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 LMX1AQ8TE12 382 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 FCRL3Q96P31 734 aaPredicted RBP16.22■□□□□ 0.19
CKS1B-202ENST00000368436 BOCQ9BWV1 1114 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 CPEB1Q9BZB8 566 aaKnown RBP16.22■□□□□ 0.19
CKS1B-202ENST00000368436 POLR1BQ9H9Y6 1135 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 SPASTQ9UBP0 616 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 PNMA8BQ9ULN7 279 aaPredicted RBP16.22■□□□□ 0.19
CKS1B-202ENST00000368436 FZD10Q9ULW2 581 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 RP1P56715 2156 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 LRP4O75096 1905 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 CPED1A4D0V7 1026 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 LRRC10BA6NIK2 292 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 ITIH2P19823 946 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 TGM2P21980 687 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 SUOXP51687 545 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 THOP1P52888 689 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 PCBP4P57723 403 aaKnown RBP16.21■□□□□ 0.19
CKS1B-202ENST00000368436 ERVPABLB-1P60509 514 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 RHOAP61586 193 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 GABREP78334 506 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 SERINC3Q13530 473 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 CYTH1Q15438 398 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 ISXQ2M1V0 245 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 DEFB133Q30KQ1 61 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 PARP15Q460N3 678 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 TMEM52BQ4KMG9 183 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 GUSBP11Q6P575 273 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 IGF2-ASQ6U949 168 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 EFL1Q7Z2Z2 1120 aaKnown RBP16.21■□□□□ 0.19
CKS1B-202ENST00000368436 GPR155Q7Z3F1 870 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 VPS36Q86VN1 386 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 RBFAQ8N0V3 343 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 UMODL1-AS1Q8N2C9 162 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 TP53I13Q8NBR0 393 aaPredicted RBP16.21■□□□□ 0.19
CKS1B-202ENST00000368436 HCAR2Q8TDS4 363 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 GRAMD1AQ96CP6 724 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 HMCESQ96FZ2 354 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 ERGIC2Q96RQ1 377 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 IL12RB2Q99665 862 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 AGPAT1Q99943 283 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 C1QTNF7Q9BXJ2 289 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 TCEAL2Q9H3H9 227 aaPredicted RBP16.21■□□□□ 0.19
CKS1B-202ENST00000368436 MBNL1Q9NR56 388 aaKnown RBP16.21■□□□□ 0.19
CKS1B-202ENST00000368436 LHX3Q9UBR4 397 aa16.21■□□□□ 0.19
CKS1B-202ENST00000368436 BPTFQ12830 3046 aa16.21■□□□□ 0.18
CKS1B-202ENST00000368436 LGALS16A8MUM7 142 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 RASA4BC9J798 803 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 LMO7DNF2Z398 122 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 INSIG1O15503 277 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 RASA4O43374 803 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 GCATO75600 419 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 EIF4A3P38919 411 aaKnown RBP16.2■□□□□ 0.18
CKS1B-202ENST00000368436 ADKP55263 362 aaKnown RBP16.2■□□□□ 0.18
CKS1B-202ENST00000368436 RPL7AP62424 266 aaKnown RBP16.2■□□□□ 0.18
CKS1B-202ENST00000368436 NR0B2Q15466 257 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 LRRC73Q5JTD7 316 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 DNAJC24Q6P3W2 148 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 SCYL2Q6P3W7 929 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 MACC1Q6ZN28 852 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 ZNF354CQ86Y25 554 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 PHACTR4Q8IZ21 702 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 NETO2Q8NC67 525 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 TPCN2Q8NHX9 752 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 CXorf40AQ8TE69 158 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 SLC39A7Q92504 469 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 PCMTD1Q96MG8 357 aaPredicted RBP16.2■□□□□ 0.18
CKS1B-202ENST00000368436 LGMNQ99538 433 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 EPAS1Q99814 870 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 CNPY3Q9BT09 278 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 LRRC61Q9BV99 259 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 CATSPERBQ9H7T0 1116 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 ASCL3Q9NQ33 180 aa16.2■□□□□ 0.18
CKS1B-202ENST00000368436 APOBEC3BQ9UH17 382 aaKnown RBP16.2■□□□□ 0.18
CKS1B-202ENST00000368436 ANKRD36A6QL64 1941 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 TEX51A0A1B0GUA7 166 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 TSPAN11A1L157 253 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 CREB3O43889 395 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 C1orf61Q13536 156 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 KLHL40Q2TBA0 621 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 PRRT3Q5FWE3 981 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 PERM1Q5SV97 790 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 C6orf132Q5T0Z8 1188 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 APTXQ7Z2E3 356 aaKnown RBP16.19■□□□□ 0.18
CKS1B-202ENST00000368436 SLC35F3Q8IY50 421 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 GLMNQ92990 594 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 MCEEQ96PE7 176 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 WRAP53Q9BUR4 548 aaKnown RBP16.19■□□□□ 0.18
CKS1B-202ENST00000368436 SLC13A1Q9BZW2 595 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 CLPBQ9H078 707 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms