RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 SCN4AP35499 1836 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 H3BNX3 289 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 ASGR1P07306 291 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 GRK4P32298 578 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 NSUN2Q08J23 767 aaKnown RBP eCLIP18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 RP9Q8TA86 221 aaKnown RBP18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 IHHQ14623 411 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 BEND5Q7L4P6 421 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 PPP2R3CQ969Q6 453 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 PHF21BQ96EK2 531 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 HMCESQ96FZ2 354 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 MRPL57Q9BQC6 102 aaKnown RBP18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 ARHGAP39Q9C0H5 1083 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 SPC25Q9HBM1 224 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 NCKIPSDQ9NZQ3 722 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 VTI1BQ9UEU0 232 aa18.26■□□□□ 0.51
UBQLN4-201ENST00000368309 XRCC1P18887 633 aaPredicted RBP18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 PRKAA2P54646 552 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 MSLNQ13421 630 aaPredicted RBP18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 GRAMD1BQ3KR37 738 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 ALFQ53S48 1182 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 FOXB2Q5VYV0 432 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 OR6P1Q8NGX9 317 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 TRIB2Q92519 343 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 NR1H4Q96RI1 486 aaPredicted RBP18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 NPAS2Q99743 824 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 TRMT13Q9NUP7 481 aaKnown RBP18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 MTF2Q9Y483 593 aaPredicted RBP18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 COPG1Q9Y678 874 aaKnown RBP18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 ZNF236Q9UL36 1845 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 TCN1P20061 433 aaPredicted RBP18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 DSC2Q02487 901 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 DSC3Q14574 896 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 GSTA3Q16772 222 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 KIAA0930Q6ICG6 404 aaPredicted RBP18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 TNFRSF12AQ9NP84 129 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 IGSF5Q9NSI5 407 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 STK39Q9UEW8 545 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 TLL2Q9Y6L7 1015 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 PEX11BO96011 259 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 CCDC166P0CW27 439 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 ETFBP38117 255 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 DPP6P42658 865 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 RAB27AP51159 221 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 USP46P62068 366 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 KDELC1Q6UW63 502 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 RASAL3Q86YV0 1011 aa18.25■□□□□ 0.51
UBQLN4-201ENST00000368309 ART3Q13508 389 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 KCNA10Q16322 511 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 AFMIDQ63HM1 303 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 C16orf89Q6UX73 402 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 LCA5Q86VQ0 697 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 TMA16Q96EY4 203 aaKnown RBP18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 GABRQQ9UN88 632 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 PRG3Q9Y2Y8 225 aaPredicted RBP18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 OR51F1A6NGY5 319 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 SLCO1B7G3V0H7 640 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 GJB3O75712 270 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 CYBAP13498 195 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 MRPS22P82650 360 aaKnown RBP18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 MS4A2Q01362 244 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 POU4F1Q01851 419 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 EFEMP1Q12805 493 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 BNC2Q6ZN30 1099 aaPredicted RBP18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 MIB1Q86YT6 1006 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 CPSF7Q8N684 471 aaKnown RBP18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 PTCD2Q8WV60 388 aaKnown RBP18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 PSMG2Q969U7 264 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 SERPINB11Q96P15 392 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 SLC25A51Q9H1U9 297 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 ZNF385DQ9H6B1 395 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 ZBTB26Q9HCK0 441 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 TBC1D13Q9NVG8 400 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 NOD1Q9Y239 953 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 KCTD3Q9Y597 815 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 TXNDC9O14530 226 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 HMBSP08397 361 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 TSPAN8P19075 237 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 ATP5F1P24539 256 aaPredicted RBP18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 SERPINH1P50454 418 aaKnown RBP18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 CRHR2Q13324 411 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 CEACAM7Q14002 265 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 PSMD5Q16401 504 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 MARC1Q5VT66 337 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 NAIF1Q69YI7 327 aaPredicted RBP18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 IFNL1Q8IU54 200 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 SNX31Q8N9S9 440 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 FAM156AQ8NDB6 213 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 SH3RF2Q8TEC5 729 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 ANKRD49Q8WVL7 239 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 CLIC5Q9NZA1 410 aa18.24■□□□□ 0.51
UBQLN4-201ENST00000368309 SOAT2O75908 522 aa18.23■□□□□ 0.51
UBQLN4-201ENST00000368309 FAM83EQ2M2I3 478 aa18.23■□□□□ 0.51
UBQLN4-201ENST00000368309 CIR1Q86X95 450 aaPredicted RBP18.23■□□□□ 0.51
UBQLN4-201ENST00000368309 TTC9BQ8N6N2 239 aa18.23■□□□□ 0.51
UBQLN4-201ENST00000368309 SERPINI1Q99574 410 aa18.23■□□□□ 0.51
UBQLN4-201ENST00000368309 TSC22D3Q99576 134 aa18.23■□□□□ 0.51
UBQLN4-201ENST00000368309 WDR41Q9HAD4 459 aa18.23■□□□□ 0.51
UBQLN4-201ENST00000368309 ASB3Q9Y575 518 aa18.23■□□□□ 0.51
UBQLN4-201ENST00000368309 A0A087X1B8 175 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms