RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 SFSWAPQ12872 951 aaKnown RBP12.4□□□□□ -0.42
PTPRK-203ENST00000368207 KPNB1Q14974 876 aaKnown RBP12.4□□□□□ -0.42
PTPRK-203ENST00000368207 PPM1JQ5JR12 505 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 CNSTQ6PJW8 725 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 PIWIL4Q7Z3Z4 852 aaKnown RBP12.4□□□□□ -0.42
PTPRK-203ENST00000368207 ANKS1BQ7Z6G8 1248 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 ECHDC2Q86YB7 292 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 OR4K2Q8NGD2 314 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 ABCG8Q9H221 673 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 VPS45Q9NRW7 570 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 PADI4Q9UM07 663 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 BTRCQ9Y297 605 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 NUP98P52948 1817 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 CARNS1A5YM72 827 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 LAG3P18627 525 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 TP53BP2Q13625 1128 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 GPR158Q5T848 1215 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 CDCA2Q69YH5 1023 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-203ENST00000368207 CRELD2Q6UXH1 353 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-203ENST00000368207 ARCQ7LC44 396 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 ZNF614Q8N883 585 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 CDYL2Q8N8U2 506 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 MAGED4Q96JG8 741 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 NSMCE2Q96MF7 247 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 SLC25A23Q9BV35 468 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 CYLDQ9NQC7 956 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 PNPOQ9NVS9 261 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 SIX4Q9UIU6 781 aa12.4□□□□□ -0.42
PTPRK-203ENST00000368207 ENO4A6NNW6 628 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 NEDD8-MDP1E9PL57 170 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 SOCS7O14512 581 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 HDAC3O15379 428 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 UNC5CO95185 931 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 F2P00734 622 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 ANXA5P08758 320 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 VAC14Q08AM6 782 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 TRAF2Q12933 501 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 MFSD5Q6N075 450 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 TAS1R3Q7RTX0 852 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 NECAB2Q7Z6G3 386 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 ZNF557Q8N988 423 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-203ENST00000368207 SELENOMQ8WWX9 145 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 SH3GL1Q99961 368 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 MRPL57Q9BQC6 102 aaKnown RBP12.39□□□□□ -0.43
PTPRK-203ENST00000368207 SELENONQ9NZV5 590 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 C5orf60A6NFR6 353 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 KCNU1A8MYU2 1149 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 USP1O94782 785 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 ATG7O95352 703 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 AP2A1O95782 977 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 TBX18O95935 607 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 MLNP12872 115 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 GABRB2P47870 512 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 NOVP48745 357 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 UBAP2LQ14157 1087 aaKnown RBP12.39□□□□□ -0.43
PTPRK-203ENST00000368207 WASHC2DQ5SRD0 308 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 OTUD3Q5T2D3 398 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-203ENST00000368207 CCDC81Q6ZN84 652 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 EFCAB3Q8N7B9 438 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 TBC1D10AQ9BXI6 508 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 TRPC4Q9UBN4 977 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 TEKT2Q9UIF3 430 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 TMEM63AO94886 807 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 LBPP18428 481 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 ILF2Q12905 390 aaKnown RBP12.39□□□□□ -0.43
PTPRK-203ENST00000368207 FRG1Q14331 258 aaKnown RBP12.39□□□□□ -0.43
PTPRK-203ENST00000368207 ALYREFQ86V81 257 aaKnown RBP12.39□□□□□ -0.43
PTPRK-203ENST00000368207 NR1H4Q96RI1 486 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-203ENST00000368207 FAM124BQ9H5Z6 455 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-203ENST00000368207 EXOSC4Q9NPD3 245 aaKnown RBP12.39□□□□□ -0.43
PTPRK-203ENST00000368207 PCDHGC4Q9Y5F7 938 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 SNX8Q9Y5X2 465 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 PRRC2BQ5JSZ5 2229 aaKnown RBP12.39□□□□□ -0.43
PTPRK-203ENST00000368207 CLUHO75153 1309 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 hCG_2014768A0A024R1R8 64 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 KANSL1LA0AUZ9 987 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 C9IYK1 514 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 H3BMM5 538 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 SYN3O14994 580 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 EOMESO95936 686 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 GJA9P57773 515 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 OGDHQ02218 1023 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 CREMQ03060 361 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 ACSM2AQ08AH3 577 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 MFSD4BQ5TF39 518 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 ACSM2BQ68CK6 577 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 CES5AQ6NT32 575 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 DHFR2Q86XF0 187 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 CSGALNACT1Q8TDX6 532 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 PYDC1Q8WXC3 89 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 FAXDC2Q96IV6 333 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 TBATAQ96M53 351 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 ASB2Q96Q27 587 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 IMPAD1Q9NX62 359 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 ZNHIT2Q9UHR6 403 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 FBXW11Q9UKB1 542 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 FZD10Q9ULW2 581 aa12.39□□□□□ -0.43
PTPRK-203ENST00000368207 TNPO3Q9Y5L0 923 aaKnown RBP12.39□□□□□ -0.43
PTPRK-203ENST00000368207 CCL16O15467 120 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 LRPAP1P30533 357 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms