RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 RBMS1P29558 406 aaKnown RBP12.61□□□□□ -0.39
MRPL55-209ENST00000366735 CCNHP51946 323 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-209ENST00000366735 PRSS12P56730 875 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 SNRPD1P62314 119 aaKnown RBP12.61□□□□□ -0.39
MRPL55-209ENST00000366735 GNA12Q03113 381 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 PTK2BQ14289 1009 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 CARD16Q5EG05 197 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 ARCQ7LC44 396 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 ZNF605Q86T29 641 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 FAM71AQ8IYT1 594 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 ZNF683Q8IZ20 524 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 ZNF548Q8NEK5 533 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-209ENST00000366735 OR7D4Q8NG98 312 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 NAT6Q93015 286 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 ISG20Q96AZ6 181 aaKnown RBP12.61□□□□□ -0.39
MRPL55-209ENST00000366735 LENG8Q96PV6 779 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-209ENST00000366735 IL12RB2Q99665 862 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 OSBPL1AQ9BXW6 950 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 GPR27Q9NS67 375 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 RAI2Q9Y5P3 530 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 FADS3Q9Y5Q0 445 aa12.61□□□□□ -0.39
MRPL55-209ENST00000366735 FOXN3O00409 490 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-209ENST00000366735 TOR1BO14657 336 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 TPP1O14773 563 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 TCEA3O75764 348 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 ENDOD1O94919 500 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 PRB1P04280 392 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 CYP11B1P15538 503 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 JUNDP17535 347 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 MAPKAPK2P49137 400 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 THOP1P52888 689 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 APBA1Q02410 837 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 CFHR1Q03591 330 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 RAD51Q06609 339 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 PDE1CQ14123 709 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-209ENST00000366735 NR0B2Q15466 257 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 KIF26BQ2KJY2 2108 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 KLHDC7AQ5VTJ3 777 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 IGF2-ASQ6U949 168 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 PARS2Q7L3T8 475 aaKnown RBP12.6□□□□□ -0.39
MRPL55-209ENST00000366735 XYLT1Q86Y38 959 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 RYBPQ8N488 228 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-209ENST00000366735 ASB12Q8WXK4 309 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 WBP1Q96G27 269 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 NAF1Q96HR8 494 aaKnown RBP12.6□□□□□ -0.39
MRPL55-209ENST00000366735 SIX2Q9NPC8 291 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 RRAGDQ9NQL2 400 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-209ENST00000366735 ZNHIT6Q9NWK9 470 aaKnown RBP12.6□□□□□ -0.39
MRPL55-209ENST00000366735 SPASTQ9UBP0 616 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 SALL4Q9UJQ4 1053 aa12.6□□□□□ -0.39
MRPL55-209ENST00000366735 POM121BA6NF01 834 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 ZSCAN5CA6NGD5 496 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-209ENST00000366735 GOLGA8SH3BPF8 625 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 CCP110O43303 1012 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 PAK4O96013 591 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-209ENST00000366735 GSRP00390 522 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 TFE3P19532 575 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-209ENST00000366735 FLT3P36888 993 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 ARF5P84085 180 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 FZD2Q14332 565 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 DRAP1Q14919 205 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-209ENST00000366735 ZNF805Q5CZA5 627 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 ZNF542PQ5EBM4 170 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 C3orf38Q5JPI3 329 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 E4F1Q66K89 784 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-209ENST00000366735 WDR59Q6PJI9 974 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 RBM44Q6ZP01 1051 aaKnown RBP12.59□□□□□ -0.39
MRPL55-209ENST00000366735 FAM131BQ86XD5 332 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 ZNF677Q86XU0 584 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 LMX1AQ8TE12 382 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 HIC2Q96JB3 615 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 BMFQ96LC9 184 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 TBATAQ96M53 351 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 CFAP57Q96MR6 1250 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 SLC13A1Q9BZW2 595 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 TM6SF2Q9BZW4 377 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 ANLNQ9NQW6 1124 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 APOBEC3BQ9UH17 382 aaKnown RBP12.59□□□□□ -0.39
MRPL55-209ENST00000366735 FCF1Q9Y324 198 aaKnown RBP12.59□□□□□ -0.39
MRPL55-209ENST00000366735 PCDHGA4Q9Y5G9 962 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 SNX10Q9Y5X0 201 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 COL6A6A6NMZ7 2263 aa12.59□□□□□ -0.39
MRPL55-209ENST00000366735 SCN8AQ9UQD0 1980 aa12.58□□□□□ -0.4
MRPL55-209ENST00000366735 CPED1A4D0V7 1026 aa12.58□□□□□ -0.4
MRPL55-209ENST00000366735 EME2A4GXA9 379 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-209ENST00000366735 KLK10O43240 276 aa12.58□□□□□ -0.4
MRPL55-209ENST00000366735 ZMPSTE24O75844 475 aa12.58□□□□□ -0.4
MRPL55-209ENST00000366735 C1QL1O75973 258 aa12.58□□□□□ -0.4
MRPL55-209ENST00000366735 NEBLO76041 1014 aa12.58□□□□□ -0.4
MRPL55-209ENST00000366735 PNMA6AP0CW24 399 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-209ENST00000366735 GIMD1P0DJR0 217 aa12.58□□□□□ -0.4
MRPL55-209ENST00000366735 UCHL3P15374 230 aa12.58□□□□□ -0.4
MRPL55-209ENST00000366735 SDC4P31431 198 aa12.58□□□□□ -0.4
MRPL55-209ENST00000366735 POLR2FP61218 127 aaKnown RBP12.58□□□□□ -0.4
MRPL55-209ENST00000366735 YPEL5P62699 121 aa12.58□□□□□ -0.4
MRPL55-209ENST00000366735 NRG1Q02297 640 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-209ENST00000366735 CDKN3Q16667 212 aa12.58□□□□□ -0.4
MRPL55-209ENST00000366735 ISXQ2M1V0 245 aa12.58□□□□□ -0.4
MRPL55-209ENST00000366735 TAF3Q5VWG9 929 aa12.58□□□□□ -0.4
MRPL55-209ENST00000366735 RWDD4Q6NW29 188 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms