RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 COMPP49747 757 aaPredicted RBP4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 ART1P52961 327 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 RRP1P56182 461 aaKnown RBP4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 ADORA2A-AS1P86434 159 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 TBL3Q12788 808 aaKnown RBP4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 KIF5AQ12840 1032 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 MAP3K21Q5TCX8 1036 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 ATG16L1Q676U5 607 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 NCAPH2Q6IBW4 605 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 C18orf65Q6ZTR6 163 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 CREB3L2Q70SY1 520 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 PGBD5Q8N414 524 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 SMRP1Q8NCR6 262 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 SH3KBP1Q96B97 665 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 ELP4Q96EB1 424 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 PEMTQ9UBM1 199 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 NDRG3Q9UGV2 375 aa4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 AGO1Q9UL18 857 aaKnown RBP4.7□□□□□ -1.66
RNU4-28P-201ENST00000364739 ARHGAP10A1A4S6 786 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 CBY3A6NI87 242 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 KLRF2D3W0D1 207 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 VNN2O95498 520 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 POLBP06746 335 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 SSTR2P30874 369 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 RYKP34925 604 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 RPL3P39023 403 aaKnown RBP4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 UBE3AQ05086 875 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 EEF1A2Q05639 463 aaKnown RBP4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 CHRNDQ07001 517 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 RUNX2Q13950 521 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 EFR3AQ14156 821 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 HLFQ16534 295 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 NFIL3Q16649 462 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 SOWAHAQ2M3V2 549 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 SLC22A25Q6T423 547 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 NR2C2APQ86WQ0 139 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 CCDC105Q8IYK2 499 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 PLD5Q8N7P1 536 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 RFWD2Q8NHY2 731 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 FAM216AQ8WUB2 273 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 TMEM170AQ8WVE7 144 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 HERVK_113Q902F9 699 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 TRIB2Q92519 343 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 LBHD1Q9BQE6 289 aaPredicted RBP4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 HEMGNQ9BXL5 484 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 ANKRD10Q9NXR5 420 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 OR6C3Q9NZP0 311 aa4.69□□□□□ -1.66
RNU4-28P-201ENST00000364739 HSPB2A8KAH6 182 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 IFNL4K9M1U5 179 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 TSPAN3O60637 253 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 AFPP02771 609 aaKnown RBP4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 URODP06132 367 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 SLC2A4P14672 509 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 HDAC4P56524 1084 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 CLDN2P57739 230 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 SEC61A1P61619 476 aaKnown RBP4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 COASYQ13057 564 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 SLC39A14Q15043 492 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 ARHGEF6Q15052 776 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 SF3B4Q15427 424 aaKnown RBP eCLIP4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 HSPB2Q16082 182 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 ESCO2Q56NI9 601 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 C9orf57Q5W0N0 161 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 LRRC8EQ6NSJ5 796 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 BBS12Q6ZW61 710 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 FAM160B2Q86V87 743 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 ANKRD18AQ8IVF6 992 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 KIAA2013Q8IYS2 634 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 PARP16Q8N5Y8 322 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 AADATQ8N5Z0 425 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 ZMIZ2Q8NF64 920 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 ERGIC1Q969X5 290 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 RTP4Q96DX8 246 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 MAELQ96JY0 434 aaKnown RBP4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 SCLT1Q96NL6 688 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 C1QTNF4Q9BXJ3 329 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 PLSCR4Q9NRQ2 329 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 CYSLTR2Q9NS75 346 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 SNTG1Q9NSN8 517 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 BABAM1Q9NWV8 329 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 GGA3Q9NZ52 723 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 IL1RAPL1Q9NZN1 696 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 DGKBQ9Y6T7 804 aa4.68□□□□□ -1.66
RNU4-28P-201ENST00000364739 hDV102S1A0JD36 115 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 BTBD18B2RXH4 712 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 EBAG9O00559 213 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 CH25HO95992 272 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 MYF6P23409 242 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 PGM1P36871 562 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 TUBA1BP68363 451 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 TRAF2Q12933 501 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 MYBPHQ13203 477 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 DHX34Q14147 1143 aaKnown RBP4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 TAF12Q16514 161 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 XKR9Q5GH70 373 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 RHBDF2Q6PJF5 856 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 H1FNTQ75WM6 255 aaPredicted RBP4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 TBC1D26Q86UD7 250 aa4.67□□□□□ -1.66
RNU4-28P-201ENST00000364739 GPAT4Q86UL3 456 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms