RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 A4GNTQ9UNA3 340 aa2.53□□□□□ -2
RNU4-56P-201ENST00000364700 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.53□□□□□ -2
RNU4-56P-201ENST00000364700 TAF1P21675 1872 aa2.53□□□□□ -2
RNU4-56P-201ENST00000364700 TEX13CA0A0J9YWL9 993 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 ARHGAP10A1A4S6 786 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 CLEC18AA5D8T8 446 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 KLRF2D3W0D1 207 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 I6L893 689 aaPredicted RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 INSIG1O15503 277 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 PRPF4O43172 522 aaKnown RBP eCLIP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 SEC14L2O76054 403 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 HOXB5P09067 269 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 MYZAPP0CAP1 466 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 CHRNB1P11230 501 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 PRF1P14222 555 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 PTPN2P17706 415 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 AGAP20933 346 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 YWHAQP27348 245 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 FMO4P31512 558 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 SHMT1P34896 483 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 GARSP41250 739 aaKnown RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 SKIV2L2P42285 1042 aaKnown RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 CPA2P48052 419 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 RFX5P48382 616 aaPredicted RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 RASSF2P50749 326 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 DRG2P55039 364 aaKnown RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 EIF3BP55884 814 aaKnown RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 HDAC4P56524 1084 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 SELENOVP59797 346 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 RPS3AP61247 264 aaKnown RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 CEBPZQ03701 1054 aaKnown RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 ZNF91Q05481 1191 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 FAM27E3Q08E93 113 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 TMEM115Q12893 351 aaPredicted RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 DCTN2Q13561 401 aaKnown RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 EIF4A2Q14240 407 aaKnown RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 C6orf10Q5SRN2 563 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 RUSC1-AS1Q66K80 236 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 ATG9BQ674R7 924 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 AWAT2Q6E213 333 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 PLEKHA7Q6IQ23 1121 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 MIS18BP1Q6P0N0 1132 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 CDC73Q6P1J9 531 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 NCEH1Q6PIU2 408 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 CYP20A1Q6UW02 462 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 ATF7IPQ6VMQ6 1270 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 TRILQ7L0X0 811 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 FASTKD5Q7L8L6 764 aaKnown RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 SLC46A3Q7Z3Q1 461 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 TECPR1Q7Z6L1 1165 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 TMC8Q8IU68 726 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 ADGRF4Q8IZF3 695 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 CNTROBQ8N137 903 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 GHDCQ8N2G8 530 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 CLEC18CQ8NCF0 446 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 TMEM116Q8NCL8 245 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 CADM4Q8NFZ8 388 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 ETNPPLQ8TBG4 499 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 TMEM163Q8TC26 289 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 GDPD5Q8WTR4 605 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 PSPC1Q8WXF1 523 aaKnown RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 USP6NLQ92738 828 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 INTS12Q96CB8 462 aaKnown RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 NSUN4Q96CB9 384 aaKnown RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 PABPC5Q96DU9 382 aaKnown RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 URB1-AS1Q96HZ7 61 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 WDFY2Q96P53 400 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 IFT27Q9BW83 186 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 B3GNT4Q9C0J1 378 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 AAMDCQ9H7C9 122 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 POLR1BQ9H9Y6 1135 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 IL1RAPL1Q9NZN1 696 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 SWAP70Q9UH65 585 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 IPO11Q9UI26 975 aaKnown RBP2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 ZNF580Q9UK33 172 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 DHDHQ9UQ10 334 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 PCDHGB5Q9Y5G0 923 aa2.52□□□□□ -2.01
RNU4-56P-201ENST00000364700 A0A1W2PRG0 241 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 C17orf102A2RUQ5 167 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 GAGE12JA6NER3 117 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 LIPT2A6NK58 231 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 KCNU1A8MYU2 1149 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 LDB2O43679 373 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 GJB3O75712 270 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 CBX6O95503 412 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 TOMM40O96008 361 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 TFP02787 698 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 ACADMP11310 421 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 ZNF8P17098 575 aaPredicted RBP2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 CDH2P19022 906 aaPredicted RBP2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 CDAP32320 146 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 HADHAP40939 763 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 GABRB2P47870 512 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 PIP4K2AP48426 406 aaPredicted RBP2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 PPP3CCP48454 512 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 OLR1P78380 273 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 ADORA2A-AS1P86434 159 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 SETQ01105 290 aaPredicted RBP2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 PRKG2Q13237 762 aa2.51□□□□□ -2.01
RNU4-56P-201ENST00000364700 ACVR2BQ13705 512 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms