RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 ARHGAP28Q9P2N2 729 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 PLIN4Q96Q06 1357 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 IRF6O14896 467 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 GCATO75600 419 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 CCNKO75909 580 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 METTL18O95568 372 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 LTFP02788 710 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 HIST1H2AGP0C0S8 130 aaPredicted RBP16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 HIST1H2ADP20671 130 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 MAPRE1Q15691 268 aaKnown RBP16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 DCAF4L1Q3SXM0 396 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 ILDR2Q71H61 639 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 UNC5BQ8IZJ1 945 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 MPP5Q8N3R9 675 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 SLC16A10Q8TF71 515 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 AZIN2Q96A70 460 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 HIST1H2AHQ96KK5 128 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 HIST1H2AJQ99878 128 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 H2AFJQ9BTM1 129 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 XPNPEP1Q9NQW7 623 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 GNPTGQ9UJJ9 305 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 TOR1BO14657 336 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 DNAJA2O60884 412 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 VTNP04004 478 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 POU1F1P28069 291 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 CAPGP40121 348 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 ACADVLP49748 655 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 GRM3Q14832 879 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 C6orf183Q5T699 404 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 NOTUMQ6P988 496 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 NIPA2Q8N8Q9 360 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 PNPT1Q8TCS8 783 aaKnown RBP16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 NXNL1Q96CM4 212 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 MFSD3Q96ES6 412 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 RHOBTB2Q9BYZ6 727 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 PCDHAC2Q9Y5I4 1007 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 RICTORQ6R327 1708 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 SLC22A2O15244 555 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 FBXO21O94952 628 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 HMBSP08397 361 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 KCNJ11Q14654 390 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 CENPSQ8N2Z9 138 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 VPS37AQ8NEZ2 397 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 TRAPPC12Q8WVT3 735 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 MCRS1Q96EZ8 462 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 PAWRQ96IZ0 340 aaKnown RBP16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 ACOX2Q99424 681 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 TEX12Q9BXU0 123 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 SH3PXD2BA1X283 911 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 THOC7Q6I9Y2 204 aaKnown RBP16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 TTC30BQ8N4P2 665 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 CMASQ8NFW8 434 aaPredicted RBP16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 OR56A4Q8NGH8 313 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 CANT1Q8WVQ1 401 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 RSPH1Q8WYR4 309 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 LMO7Q8WWI1 1683 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 FAM159BA6NKW6 160 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 STX7O15400 261 aaKnown RBP16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 MAGEB3O15480 346 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 RECQL5O94762 991 aaPredicted RBP16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 ERCC2P18074 760 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 XPAP23025 273 aaPredicted RBP16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 TIGD2Q4W5G0 525 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 TJAP1Q5JTD0 557 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 LUZP2Q86TE4 346 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 PCDH19Q8TAB3 1148 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 ZNF516Q92618 1163 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 ARMC7Q9H6L4 198 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 GPBP1L1Q9HC44 474 aaPredicted RBP16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 INVSQ9Y283 1065 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 GMPPBQ9Y5P6 360 aa16.09■□□□□ 0.17
CLSTN1-201ENST00000361311 MED1Q15648 1581 aaPredicted RBP16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 FAM25AB3EWG3 89 aa16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 FAM25CB3EWG5 89 aa16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 FAM25GB3EWG6 89 aa16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 PDLIM1O00151 329 aa16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 AZIN1O14977 448 aa16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 COL6A2P12110 1019 aa16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 GRIA1P42261 906 aa16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 STT3AP46977 705 aa16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 ARPC4P59998 168 aa16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 OGDHQ02218 1023 aa16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 VPS26BQ4G0F5 336 aa16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 MBLAC2Q68D91 279 aa16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 WNT8BQ93098 351 aa16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 ACO2Q99798 780 aaKnown RBP16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 KIF1AQ12756 1690 aa16.08■□□□□ 0.17
CLSTN1-201ENST00000361311 ASB14A6NK59 587 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 GPIP06744 558 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 NOS2P35228 1153 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 PRKG2Q13237 762 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 PDZK1Q5T2W1 519 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 METTL7BQ6UX53 244 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 SPATA2LQ8IUW3 424 aaPredicted RBP16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 TRMOQ9BU70 441 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 CHRAC1Q9NRG0 131 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 CNOT6Q9ULM6 557 aaKnown RBP16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 EFCAB10A6NFE3 127 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 E7ENX8 843 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 EI24O14681 340 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms