RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 PQLC1Q8N2U9 271 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 ZNF781Q8N8C0 355 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 TEPSINQ96N21 525 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 TM6SF2Q9BZW4 377 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 ZNF395Q9H8N7 513 aaPredicted RBP16.47■□□□□ 0.23
SCAF1-201ENST00000360565 BPIFA1Q9NP55 256 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 CYLDQ9NQC7 956 aa16.47■□□□□ 0.23
SCAF1-201ENST00000360565 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.46■□□□□ 0.23
SCAF1-201ENST00000360565 ILF2Q12905 390 aaKnown RBP16.46■□□□□ 0.23
SCAF1-201ENST00000360565 NEDD8Q15843 81 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 ARMC12Q5T9G4 340 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 SYPL2Q5VXT5 272 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 SLC44A2Q8IWA5 706 aaPredicted RBP16.46■□□□□ 0.23
SCAF1-201ENST00000360565 C7orf43Q8WVR3 580 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 LZICQ8WZA0 190 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 VPS33AQ96AX1 596 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 TSPAN18Q96SJ8 248 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 RTKNQ9BST9 563 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 TBCDQ9BTW9 1192 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 TRAF6Q9Y4K3 522 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.46■□□□□ 0.23
SCAF1-201ENST00000360565 TLR5O60602 858 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 PQBP1O60828 265 aaKnown RBP16.46■□□□□ 0.23
SCAF1-201ENST00000360565 NMBRP28336 390 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 SLC7A2P52569 658 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 PPIDQ08752 370 aaKnown RBP16.46■□□□□ 0.23
SCAF1-201ENST00000360565 GRIK3Q13003 919 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 ACSBG2Q5FVE4 666 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 ESRP1Q6NXG1 681 aaKnown RBP16.46■□□□□ 0.23
SCAF1-201ENST00000360565 MARK2Q7KZI7 788 aaKnown RBP16.46■□□□□ 0.23
SCAF1-201ENST00000360565 NKAPQ8N5F7 415 aaKnown RBP16.46■□□□□ 0.23
SCAF1-201ENST00000360565 CDYL2Q8N8U2 506 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 ATAD1Q8NBU5 361 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 CASP10Q92851 521 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 C9orf16Q9BUW7 83 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 BCO2Q9BYV7 579 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 CIPCQ9C0C6 399 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 S100A14Q9HCY8 104 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 IMPAD1Q9NX62 359 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 VPS4BO75351 444 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 SNUPNO95149 360 aaKnown RBP16.46■□□□□ 0.23
SCAF1-201ENST00000360565 MAPK1P28482 360 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 MAP3K10Q02779 954 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 LDB1Q86U70 411 aaPredicted RBP16.46■□□□□ 0.23
SCAF1-201ENST00000360565 TAC4Q86UU9 113 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 OTULINQ96BN8 352 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 CDH22Q9UJ99 828 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 FZD10Q9ULW2 581 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 WASF2Q9Y6W5 498 aa16.46■□□□□ 0.23
SCAF1-201ENST00000360565 GNG14A0A1W2PPG7 69 aa16.46■□□□□ 0.22
SCAF1-201ENST00000360565 CAPN8A6NHC0 703 aa16.46■□□□□ 0.22
SCAF1-201ENST00000360565 CCL22O00626 93 aa16.46■□□□□ 0.22
SCAF1-201ENST00000360565 CCT8P50990 548 aa16.46■□□□□ 0.22
SCAF1-201ENST00000360565 MTA1Q13330 715 aa16.46■□□□□ 0.22
SCAF1-201ENST00000360565 SH3D19Q5HYK7 790 aa16.46■□□□□ 0.22
SCAF1-201ENST00000360565 METTL21CQ5VZV1 264 aa16.46■□□□□ 0.22
SCAF1-201ENST00000360565 CUZD1Q86UP6 607 aa16.46■□□□□ 0.22
SCAF1-201ENST00000360565 CLYBLQ8N0X4 340 aa16.46■□□□□ 0.22
SCAF1-201ENST00000360565 C6orf203Q9P0P8 240 aaPredicted RBP16.46■□□□□ 0.22
SCAF1-201ENST00000360565 MTF2Q9Y483 593 aaPredicted RBP16.46■□□□□ 0.22
SCAF1-201ENST00000360565 MYH3P11055 1940 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 C15orf38-AP3S2A0A0A6YYH1 394 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 A0A1W2PQH9 124 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 LGR5O75473 907 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 SLC18A1P54219 525 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 FOLH1Q04609 750 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 BCL2L1Q07817 233 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 ZNF284Q2VY69 593 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 RALGPS1Q5JS13 557 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 ARPINQ7Z6K5 226 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 ATG16L2Q8NAA4 619 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 UROC1Q96N76 676 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 NR1H4Q96RI1 486 aaPredicted RBP16.45■□□□□ 0.22
SCAF1-201ENST00000360565 TEX12Q9BXU0 123 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 TEX264Q9Y6I9 313 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 MGAT4DA6NG13 374 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 AZIN1O14977 448 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 APOA1P02647 267 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 PBLDP30039 288 aaPredicted RBP16.45■□□□□ 0.22
SCAF1-201ENST00000360565 PLD1Q13393 1074 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 HIST2H2ACQ16777 129 aaPredicted RBP16.45■□□□□ 0.22
SCAF1-201ENST00000360565 CDCA2Q69YH5 1023 aaPredicted RBP16.45■□□□□ 0.22
SCAF1-201ENST00000360565 HIST2H2AA3Q6FI13 130 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 GK5Q6ZS86 529 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 CAMK1DQ8IU85 385 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 HERPUD2Q9BSE4 406 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 STRA6Q9BX79 667 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 VPS45Q9NRW7 570 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 OPTCQ9UBM4 332 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 KLQ9UEF7 1012 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 EGFL7Q9UHF1 273 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 PADI3Q9ULW8 664 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 RHBDF2Q6PJF5 856 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 DENND1CQ8IV53 801 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 CFAP52Q8N1V2 620 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 RAB42Q8N4Z0 105 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 RNF39Q9H2S5 420 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 AGO3Q9H9G7 860 aaKnown RBP16.45■□□□□ 0.22
SCAF1-201ENST00000360565 PSMD13Q9UNM6 376 aa16.45■□□□□ 0.22
SCAF1-201ENST00000360565 AP4B1Q9Y6B7 739 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms