RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ZNF180Q9UJW8 692 aa9.37□□□□□ -0.91
VPS13A-203ENST00000360280 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.37□□□□□ -0.91
VPS13A-203ENST00000360280 MATN2O00339 956 aa9.37□□□□□ -0.91
VPS13A-203ENST00000360280 ORC5O43913 435 aa9.37□□□□□ -0.91
VPS13A-203ENST00000360280 OR10H2O60403 315 aa9.37□□□□□ -0.91
VPS13A-203ENST00000360280 HSD3B2P26439 372 aa9.37□□□□□ -0.91
VPS13A-203ENST00000360280 OR1E1P30953 314 aa9.37□□□□□ -0.91
VPS13A-203ENST00000360280 TMC7Q7Z402 723 aa9.37□□□□□ -0.91
VPS13A-203ENST00000360280 LPCAT1Q8NF37 534 aa9.37□□□□□ -0.91
VPS13A-203ENST00000360280 PPP1R3GB7ZBB8 358 aa9.37□□□□□ -0.91
VPS13A-203ENST00000360280 B3GAT3O94766 335 aa9.37□□□□□ -0.91
VPS13A-203ENST00000360280 PPM1LQ5SGD2 360 aa9.37□□□□□ -0.91
VPS13A-203ENST00000360280 LEMD2Q8NC56 503 aa9.37□□□□□ -0.91
VPS13A-203ENST00000360280 NKX2-3Q8TAU0 364 aa9.37□□□□□ -0.91
VPS13A-203ENST00000360280 TSPAN18Q96SJ8 248 aa9.37□□□□□ -0.91
VPS13A-203ENST00000360280 ZNF12P17014 697 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 TNFRSF8P28908 595 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 BUD31P41223 144 aaPredicted RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 SRFBP1Q8NEF9 429 aaKnown RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 CYP3A43Q9HB55 503 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 IFT46Q9NQC8 304 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 VAPBO95292 243 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 THP07101 528 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 MAZP56270 477 aaKnown RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 RFTN2Q52LD8 501 aaPredicted RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 WDR49Q8IV35 697 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 ZC3H7AQ8IWR0 971 aaKnown RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 C12orf56Q8IXR9 622 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 NOL11Q9H8H0 719 aaKnown RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 CDHR5Q9HBB8 845 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 RAB26Q9ULW5 256 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 OVOS2A0A0G2JMS6 1433 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 TRIM38O00635 465 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 CHADO15335 359 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 CBX6O95503 412 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 ANXA8L1Q5VT79 327 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 MAGEL2Q9UJ55 1249 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 CDH7Q9ULB5 785 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 OAS3Q9Y6K5 1087 aaKnown RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 EFEMP1Q12805 493 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 LSM12Q3MHD2 195 aaKnown RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 THG1LQ9NWX6 298 aaKnown RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 SUV39H1O43463 412 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 RPA3P35244 121 aaPredicted RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 GRHL2Q6ISB3 625 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 PPP1R16AQ96I34 528 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 RSPH9Q9H1X1 276 aaPredicted RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 ERBB3P21860 1342 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 RERGQ96A58 199 aaPredicted RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 CPS1P31327 1500 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 EPORP19235 508 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 ACAP2Q15057 778 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 NFE2Q16621 373 aaPredicted RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 MPZL3Q6UWV2 235 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 KCNH7Q9NS40 1196 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 GSTT2BP0CG30 244 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 ARL3P36405 182 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 ZIK1Q3SY52 487 aaPredicted RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 ZSWIM2Q8NEG5 633 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 AENQ8WTP8 325 aaKnown RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 SMARCD1Q96GM5 515 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 CGRRF1Q99675 332 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 MGME1Q9BQP7 344 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 CCDC86Q9H6F5 360 aaKnown RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 EXD2Q9NVH0 621 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 ADRA2BP18089 450 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 EPHB3P54753 998 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 RETSATQ6NUM9 610 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 FSTL5Q8N475 847 aaPredicted RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 SIPA1Q96FS4 1042 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 ADAM28Q9UKQ2 775 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 SLC30A4O14863 429 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 MSR1P21757 451 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 COL26A1Q96A83 441 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 ZNF285Q96NJ3 590 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 FGF10O15520 208 aaPredicted RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 WFS1O76024 890 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 JCHAINP01591 159 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 URODP06132 367 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 GLI1P08151 1106 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 CDH5P33151 784 aaPredicted RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 EIF5AL1Q6IS14 154 aaKnown RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 CNSTQ6PJW8 725 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 TBC1D21Q8IYX1 336 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 ANKRD13AQ8IZ07 590 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 DIRAS2Q96HU8 199 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 SH2D3AQ9BRG2 576 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 PRPF19Q9UMS4 504 aaKnown RBP9.36□□□□□ -0.91
VPS13A-203ENST00000360280 KCNIP3Q9Y2W7 256 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 C21orf2O43822 256 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 NOL4O94818 638 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 SERPINA4P29622 427 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 SMU1Q2TAY7 513 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 PPP3R2Q96LZ3 170 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 SEMA4AQ9H3S1 761 aa9.36□□□□□ -0.91
VPS13A-203ENST00000360280 ZNF608Q9ULD9 1512 aaPredicted RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 CLUHO75153 1309 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 RPS6KA4O75676 772 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 PIGNO95427 931 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 TTPAP49638 278 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms