RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 TDRD1Q9BXT4 1180 aaKnown RBP17.24■□□□□ 0.35
TPM1-205ENST00000357980 EBF3Q9H4W6 596 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 MRM3Q9HC36 420 aaKnown RBP17.24■□□□□ 0.35
TPM1-205ENST00000357980 PRKAG3Q9UGI9 489 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 TBK1Q9UHD2 729 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 TCAF1Q9Y4C2 921 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 FAM169AQ9Y6X4 670 aa17.24■□□□□ 0.35
TPM1-205ENST00000357980 OTOL1A6NHN0 477 aaPredicted RBP17.23■□□□□ 0.35
TPM1-205ENST00000357980 TRIM24O15164 1050 aa17.23■□□□□ 0.35
TPM1-205ENST00000357980 NFATC1O95644 943 aa17.23■□□□□ 0.35
TPM1-205ENST00000357980 FGF1P05230 155 aa17.23■□□□□ 0.35
TPM1-205ENST00000357980 SRCP12931 536 aa17.23■□□□□ 0.35
TPM1-205ENST00000357980 STK19P49842 368 aaPredicted RBP17.23■□□□□ 0.35
TPM1-205ENST00000357980 GYS2P54840 703 aa17.23■□□□□ 0.35
TPM1-205ENST00000357980 ATXN7L2Q5T6C5 722 aaPredicted RBP17.23■□□□□ 0.35
TPM1-205ENST00000357980 TMEM215Q68D42 235 aa17.23■□□□□ 0.35
TPM1-205ENST00000357980 ZNF449Q6P9G9 518 aa17.23■□□□□ 0.35
TPM1-205ENST00000357980 C12orf40Q86WS4 652 aa17.23■□□□□ 0.35
TPM1-205ENST00000357980 LRRC6Q86X45 466 aa17.23■□□□□ 0.35
TPM1-205ENST00000357980 ETFBKMTQ8IXQ9 262 aa17.23■□□□□ 0.35
TPM1-205ENST00000357980 FAM76AQ8TAV0 307 aa17.23■□□□□ 0.35
TPM1-205ENST00000357980 E2F7Q96AV8 911 aa17.23■□□□□ 0.35
TPM1-205ENST00000357980 IFT43Q96FT9 208 aa17.23■□□□□ 0.35
TPM1-205ENST00000357980 RPL10LQ96L21 214 aaKnown RBP17.23■□□□□ 0.35
TPM1-205ENST00000357980 POMKQ9H5K3 350 aa17.23■□□□□ 0.35
TPM1-205ENST00000357980 ARIH1Q9Y4X5 557 aaPredicted RBP17.23■□□□□ 0.35
TPM1-205ENST00000357980 UNC80Q8N2C7 3258 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 NDST3O95803 873 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 PRLP01236 227 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 CISD3P0C7P0 127 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 NR1D1P20393 614 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 NMBRP28336 390 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 MTHFRP42898 656 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 MSH2P43246 934 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 CBX1P83916 185 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 SULT2A1Q06520 285 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 PDGFRLQ15198 375 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 TMED2Q15363 201 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 SKIDA1Q1XH10 827 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 EMC10Q5UCC4 262 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 MFSD6LQ8IWD5 586 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 AHI1Q8N157 1196 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.22■□□□□ 0.35
TPM1-205ENST00000357980 SMRP1Q8NCR6 262 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 PPHLN1Q8NEY8 458 aaKnown RBP17.22■□□□□ 0.35
TPM1-205ENST00000357980 MRRFQ96E11 262 aaKnown RBP17.22■□□□□ 0.35
TPM1-205ENST00000357980 CERS2Q96G23 380 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 RANBP9Q96S59 729 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 TM6SF2Q9BZW4 377 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 HPS4Q9NQG7 708 aa17.22■□□□□ 0.35
TPM1-205ENST00000357980 THG1LQ9NWX6 298 aaKnown RBP17.22■□□□□ 0.35
TPM1-205ENST00000357980 SPTBN5Q9NRC6 3674 aaKnown RBP17.22■□□□□ 0.35
TPM1-205ENST00000357980 LAMP2P13473 410 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 ADRA1DP25100 572 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 ATP5DP30049 168 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 CSNK1DP48730 415 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 AP1S1P61966 158 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 ECT2LQ008S8 904 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 GALNT3Q14435 633 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 GEN1Q17RS7 908 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 DGKKQ5KSL6 1271 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 SRLQ86TD4 932 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 PPM1NQ8N819 430 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 ISG20Q96AZ6 181 aaKnown RBP17.21■□□□□ 0.35
TPM1-205ENST00000357980 PLA2G2FQ9BZM2 168 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 TREX1Q9NSU2 369 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 COLQQ9Y215 455 aaPredicted RBP17.21■□□□□ 0.35
TPM1-205ENST00000357980 CHKBQ9Y259 395 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 SLC27A6Q9Y2P4 619 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 RAI2Q9Y5P3 530 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 FOXO6A8MYZ6 492 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 DGKGP49619 791 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 MGAT5Q09328 741 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 TRAF2Q12933 501 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 MBLAC2Q68D91 279 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 EP400NLQ6ZTU2 488 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 MARK2Q7KZI7 788 aaKnown RBP17.21■□□□□ 0.35
TPM1-205ENST00000357980 EXOC3L1Q86VI1 746 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 SLC26A11Q86WA9 606 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 CTAGE3PQ8IX95 158 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 MZB1Q8WU39 189 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 VOPP1Q96AW1 172 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 ELSPBP1Q96BH3 223 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 ECT2Q9H8V3 914 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 IL1RAPL1Q9NZN1 696 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 SLC25A13Q9UJS0 675 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 ZNF180Q9UJW8 692 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 PCDHGC4Q9Y5F7 938 aa17.21■□□□□ 0.35
TPM1-205ENST00000357980 HEATR9A2RTY3 570 aa17.2■□□□□ 0.34
TPM1-205ENST00000357980 MROH6A6NGR9 719 aa17.2■□□□□ 0.34
TPM1-205ENST00000357980 UGT1A9O60656 530 aa17.2■□□□□ 0.34
TPM1-205ENST00000357980 TULP3O75386 442 aa17.2■□□□□ 0.34
TPM1-205ENST00000357980 INHBAP08476 426 aa17.2■□□□□ 0.34
TPM1-205ENST00000357980 PDHA1P08559 390 aa17.2■□□□□ 0.34
TPM1-205ENST00000357980 ERVK-10P10266 1014 aa17.2■□□□□ 0.34
TPM1-205ENST00000357980 ALADP13716 330 aa17.2■□□□□ 0.34
TPM1-205ENST00000357980 GBP2P32456 591 aaPredicted RBP17.2■□□□□ 0.34
TPM1-205ENST00000357980 HPDP32754 393 aaPredicted RBP17.2■□□□□ 0.34
TPM1-205ENST00000357980 NAB1Q13506 487 aa17.2■□□□□ 0.34
TPM1-205ENST00000357980 C22orf39Q6P5X5 142 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms