RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 DPF3Q92784 378 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 SLC45A3Q96JT2 553 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 MRPL46Q9H2W6 279 aaKnown RBP20.64■□□□□ 0.89
COL13A1-202ENST00000357811 FBRSL1Q9HCM7 1045 aaKnown RBP20.64■□□□□ 0.89
COL13A1-202ENST00000357811 NT5MQ9NPB1 228 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 GIMAP2Q9UG22 337 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 MID2Q9UJV3 735 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 CRYL1Q9Y2S2 319 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 TCAF1Q9Y4C2 921 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 TSC2P49815 1807 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 SDHDO14521 159 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 RTN3O95197 1032 aaPredicted RBP20.64■□□□□ 0.89
COL13A1-202ENST00000357811 APOA4P06727 396 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 CPB1P15086 417 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 YWHAQP27348 245 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 PRDX6P30041 224 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 ETFBP38117 255 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 CD151P48509 253 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 AIF1P55008 147 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 LAMB3Q13751 1172 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 BTBD8Q5XKL5 378 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 PIM3Q86V86 326 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 EFCAB1Q9HAE3 211 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 IL1RL2Q9HB29 575 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 ZDHHC7Q9NXF8 308 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 KCTD3Q9Y597 815 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 ME2P23368 584 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 CDH13P55290 713 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 PDAP1Q13442 181 aaKnown RBP20.63■□□□□ 0.89
COL13A1-202ENST00000357811 FSCN1Q16658 493 aaKnown RBP20.63■□□□□ 0.89
COL13A1-202ENST00000357811 AGKQ53H12 422 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 OGFRL1Q5TC84 451 aaPredicted RBP20.63■□□□□ 0.89
COL13A1-202ENST00000357811 UGT2A3Q6UWM9 527 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 ANKRD49Q8WVL7 239 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 MRGPRX2Q96LB1 330 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 NCKIPSDQ9NZQ3 722 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 ANKRD6Q9Y2G4 727 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 PDCD11Q14690 1871 aaKnown RBP20.63■□□□□ 0.89
COL13A1-202ENST00000357811 ANKRD12Q6UB98 2062 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 M0QZ92 97 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 CRTAMO95727 393 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 PYGLP06737 847 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 PCSK1P29120 753 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 WNT3AP56704 352 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 CDKL1Q00532 357 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 PGAP3Q96FM1 320 aaPredicted RBP20.63■□□□□ 0.89
COL13A1-202ENST00000357811 NEU3Q9UQ49 428 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 PTGDR2Q9Y5Y4 395 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 AP4B1Q9Y6B7 739 aa20.63■□□□□ 0.89
COL13A1-202ENST00000357811 J3KR12 359 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 H2AFYO75367 372 aaKnown RBP20.62■□□□□ 0.89
COL13A1-202ENST00000357811 PIRTP0C851 137 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 PCBP1Q15365 356 aaKnown RBP eCLIP20.62■□□□□ 0.89
COL13A1-202ENST00000357811 IL23RQ5VWK5 629 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 NMUR1Q9HB89 426 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 SLC38A7Q9NVC3 462 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 SH3BP1Q9Y3L3 701 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 E7ENX8 843 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 ANXA9O76027 345 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 SLC5A3P53794 718 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 SULT2A1Q06520 285 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 UPP1Q16831 310 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 FAM110CQ1W6H9 321 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 GNASQ5JWF2 1037 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 RARS2Q5T160 578 aaKnown RBP20.62■□□□□ 0.89
COL13A1-202ENST00000357811 MFN1Q8IWA4 741 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 GTF3C2Q8WUA4 911 aaPredicted RBP20.62■□□□□ 0.89
COL13A1-202ENST00000357811 CNDP1Q96KN2 507 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 GRIP2Q9C0E4 1043 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 FAM192AQ9GZU8 254 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 ALG9Q9H6U8 611 aa20.62■□□□□ 0.89
COL13A1-202ENST00000357811 DMAP1Q9NPF5 467 aaPredicted RBP20.62■□□□□ 0.89
COL13A1-202ENST00000357811 RNASEH2AO75792 299 aaKnown RBP20.61■□□□□ 0.89
COL13A1-202ENST00000357811 CD86P42081 329 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 CPT1AP50416 773 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 COG7P83436 770 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 UGP2Q16851 508 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 INTS6LQ5JSJ4 861 aaKnown RBP20.61■□□□□ 0.89
COL13A1-202ENST00000357811 PGAM4Q8N0Y7 254 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 TMEM86AQ8N2M4 240 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 PRPF18Q99633 342 aaKnown RBP20.61■□□□□ 0.89
COL13A1-202ENST00000357811 IPO11Q9UI26 975 aaKnown RBP20.61■□□□□ 0.89
COL13A1-202ENST00000357811 RAD54BQ9Y620 910 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 PPP6CO00743 305 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 CD52P31358 61 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 RANBP1P43487 201 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 KCNC1P48547 511 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 APLFQ8IW19 511 aaPredicted RBP20.61■□□□□ 0.89
COL13A1-202ENST00000357811 OR52K2Q8NGK3 314 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 PDCD6IPQ8WUM4 868 aaKnown RBP20.61■□□□□ 0.89
COL13A1-202ENST00000357811 FCRL5Q96RD9 977 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 PARK7Q99497 189 aaKnown RBP20.61■□□□□ 0.89
COL13A1-202ENST00000357811 PRPF19Q9UMS4 504 aaKnown RBP20.61■□□□□ 0.89
COL13A1-202ENST00000357811 PTCH2Q9Y6C5 1203 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 HAS3O00219 553 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 IRAK2O43187 625 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 CHRNA1P02708 482 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 HMBSP08397 361 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 CCNCP24863 283 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 GPR15P49685 360 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms