RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 RENBPP51606 427 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 DPYSL5Q9BPU6 564 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 FAM126AQ9BYI3 521 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-202ENST00000357409 ABCB9Q9NP78 766 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 RASSF1Q9NS23 344 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 ETNK2Q9NVF9 386 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 KIAA0556O60303 1618 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 IRS2Q9Y4H2 1338 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 NCOA3Q9Y6Q9 1424 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 EIF1AYO14602 144 aaKnown RBP7.41□□□□□ -1.22
VPS13A-202ENST00000357409 SLC16A3O15427 465 aaKnown RBP7.41□□□□□ -1.22
VPS13A-202ENST00000357409 ZNF862O60290 1169 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 NRIP1P48552 1158 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 ENPEPQ07075 957 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 DNASE1L3Q13609 305 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 SGCBQ16585 318 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 ARMC4Q5T2S8 1044 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 MOXD1Q6UVY6 613 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 C19orf18Q8NEA5 215 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 OR52J3Q8NH60 311 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 TTTY10Q9BZA0 68 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 KLHL28Q9NXS3 571 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 CD48P09326 243 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 PLA2G16P53816 162 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 SEC23AQ15436 765 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 OASLQ15646 514 aaKnown RBP7.41□□□□□ -1.22
VPS13A-202ENST00000357409 ODF4Q2M2E3 257 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 SPATC1Q76KD6 591 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 NLNQ9BYT8 704 aa7.41□□□□□ -1.22
VPS13A-202ENST00000357409 C1QTNF3-AMACRE9PGA6 284 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 MT-CYBP00156 380 aaPredicted RBP7.4□□□□□ -1.22
VPS13A-202ENST00000357409 PRG2P13727 222 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 SERPINB8P50452 374 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 C2orf80Q0P641 193 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 EXOSC8Q96B26 276 aaKnown RBP7.4□□□□□ -1.22
VPS13A-202ENST00000357409 LINGO1Q96FE5 620 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 NARS2Q96I59 477 aaKnown RBP7.4□□□□□ -1.22
VPS13A-202ENST00000357409 NSMCE2Q96MF7 247 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 TBC1D13Q9NVG8 400 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 PROSCO94903 275 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 CCNB1P14635 433 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 MPSTP25325 297 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 GGT5P36269 586 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 SLC30A9Q6PML9 568 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 DEF8Q6ZN54 512 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 MMAAQ8IVH4 418 aaKnown RBP7.4□□□□□ -1.22
VPS13A-202ENST00000357409 LMX1AQ8TE12 382 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 ISCUQ9H1K1 167 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 EPB41L1Q9H4G0 881 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 CACNA2D1P54289 1103 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 GPM6BQ13491 265 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 DAW1Q8N136 415 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 SCAMP5Q8TAC9 235 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 MIEF2Q96C03 454 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 FCRL2Q96LA5 508 aaPredicted RBP7.4□□□□□ -1.22
VPS13A-202ENST00000357409 TRMT61BQ9BVS5 477 aaKnown RBP7.4□□□□□ -1.22
VPS13A-202ENST00000357409 ZYG11BQ9C0D3 744 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 IKZF2Q9UKS7 526 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 NRP1O14786 923 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 AREL1O15033 823 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 CHUKO15111 745 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 PSIP1O75475 530 aaKnown RBP7.4□□□□□ -1.22
VPS13A-202ENST00000357409 F9P00740 461 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 TGFB1P01137 390 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 ACADSP16219 412 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 NOS2P35228 1153 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 MRPS22P82650 360 aaKnown RBP7.4□□□□□ -1.22
VPS13A-202ENST00000357409 PLGLB1Q02325 96 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 UBAP2LQ14157 1087 aaKnown RBP7.4□□□□□ -1.22
VPS13A-202ENST00000357409 TTI2Q6NXR4 508 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 RPTNQ6XPR3 784 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 BEND5Q7L4P6 421 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 SATL1Q86VE3 508 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 DTX3Q8N9I9 347 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 GPER1Q99527 375 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 ATXN7L1Q9ULK2 861 aaPredicted RBP7.4□□□□□ -1.22
VPS13A-202ENST00000357409 ACKR2O00590 384 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 AP3D1O14617 1153 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 CPNE6O95741 557 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 CYP2A6P11509 494 aaPredicted RBP7.4□□□□□ -1.22
VPS13A-202ENST00000357409 PABPC1P11940 636 aaKnown RBP7.4□□□□□ -1.22
VPS13A-202ENST00000357409 PSMC3P17980 439 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 S100A3P33764 101 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 MANFP55145 182 aaKnown RBP7.4□□□□□ -1.22
VPS13A-202ENST00000357409 TRIM28Q13263 835 aaKnown RBP7.4□□□□□ -1.22
VPS13A-202ENST00000357409 MPPE1Q53F39 396 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 STXBP5Q5T5C0 1151 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 NPAS2Q99743 824 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 ABCB8Q9NUT2 735 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 NINJ2Q9NZG7 142 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 PTGFRNQ9P2B2 879 aa7.4□□□□□ -1.22
VPS13A-202ENST00000357409 ANO9A1A5B4 782 aa7.4□□□□□ -1.23
VPS13A-202ENST00000357409 FAM220BPB1ANY3 271 aa7.4□□□□□ -1.23
VPS13A-202ENST00000357409 HSPA7P48741 367 aa7.4□□□□□ -1.23
VPS13A-202ENST00000357409 DMTNQ08495 405 aa7.4□□□□□ -1.23
VPS13A-202ENST00000357409 DMPKQ09013 629 aa7.4□□□□□ -1.23
VPS13A-202ENST00000357409 ABRAQ8N0Z2 381 aa7.4□□□□□ -1.23
VPS13A-202ENST00000357409 LZTR1Q8N653 840 aa7.4□□□□□ -1.23
VPS13A-202ENST00000357409 ZMIZ2Q8NF64 920 aa7.4□□□□□ -1.23
VPS13A-202ENST00000357409 KLHL32Q96NJ5 620 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms