RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 PDE5AO76074 875 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 TOP3BO95985 862 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 ALDOAP04075 364 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 PYGLP06737 847 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 APRTP07741 180 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 ALDH1A3P47895 512 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 TUFMP49411 452 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 EPHB1P54762 984 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 SMARCB1Q12824 385 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 TAF12Q16514 161 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 CA9Q16790 459 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 SLC25A52Q3SY17 297 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 TMEM259Q4ZIN3 620 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 BOLA3Q53S33 107 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 FAM182AQ5T1J6 154 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 N4BP2L1Q5TBK1 243 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 FAXCQ5TGI0 409 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 MPP5Q8N3R9 675 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 C2orf15Q8WU43 125 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 KLHL5Q96PQ7 755 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 SLC2A13Q96QE2 648 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 RTKNQ9BST9 563 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 IRAK4Q9NWZ3 460 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 DDIT4Q9NX09 232 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 RAB26Q9ULW5 256 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 STAP1Q9ULZ2 295 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 DTNAQ9Y4J8 743 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 UNC80Q8N2C7 3258 aa12.83□□□□□ -0.35
RTFDC1-202ENST00000357348 CARNS1A5YM72 827 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 RFXAPO00287 272 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 OR6B1O95007 311 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 METTL18O95568 372 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 ITGA2BP08514 1039 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 MLNP12872 115 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 ARRB2P32121 409 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 PLD1Q13393 1074 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 GPM6BQ13491 265 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 SEMA5AQ13591 1074 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 PDE1CQ14123 709 aaPredicted RBP12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 TLR1Q15399 786 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 LRRC36Q1X8D7 754 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 PPP6R3Q5H9R7 873 aaPredicted RBP12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 PPP2R2DQ66LE6 453 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 TPGS2Q68CL5 300 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 FRMD7Q6ZUT3 714 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 HPS6Q86YV9 775 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 CDKL3Q8IVW4 592 aaPredicted RBP12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 DEFB107AQ8IZN7 70 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 PYROXD2Q8N2H3 581 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 PCDH19Q8TAB3 1148 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 PPP1R14CQ8TAE6 165 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 DEPDC1BQ8WUY9 529 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 NPY6RQ99463 290 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 C11orf84Q9BUA3 381 aaPredicted RBP12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 FBXO44Q9H4M3 255 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 ZNF696Q9H7X3 374 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 PCDH18Q9HCL0 1135 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 PNPOQ9NVS9 261 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 CIDEBQ9UHD4 219 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 GMEB1Q9Y692 573 aa12.83□□□□□ -0.36
RTFDC1-202ENST00000357348 DNAJA2O60884 412 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 TMCC1O94876 653 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 COX4I1P13073 169 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 DESP17661 470 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 SCNN1AP37088 669 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 PTPN9P43378 593 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 METTL21CQ5VZV1 264 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 C16orf46Q6P387 395 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 BORAQ6PGQ7 559 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 TAC4Q86UU9 113 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 AHI1Q8N157 1196 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 PQLC1Q8N2U9 271 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 MRPL43Q8N983 215 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 LZICQ8WZA0 190 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 CASP10Q92851 521 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 RNF34Q969K3 372 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 ZNF512Q96ME7 567 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 TRIM56Q9BRZ2 755 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 ZNF670Q9BS34 389 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 SNRNP25Q9BV90 132 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 FNIP2Q9P278 1114 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 VPS28Q9UK41 221 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 PRPF19Q9UMS4 504 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 ARHGAP26Q9UNA1 814 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 SCML2Q9UQR0 700 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 HEY1Q9Y5J3 304 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 MAP3K6O95382 1288 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 ADH1AP07327 375 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 ABCE1P61221 599 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 PACS1Q6VY07 963 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 B3GNT6Q6ZMB0 384 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 MIB1Q86YT6 1006 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 TTC16Q8NEE8 873 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 DQX1Q8TE96 717 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 PPP4R1Q8TF05 950 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 RNF139Q8WU17 664 aa12.82□□□□□ -0.36
RTFDC1-202ENST00000357348 CENPIQ92674 756 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms