RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 NOL11Q9H8H0 719 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 VPS45Q9NRW7 570 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 SNTG2Q9NY99 539 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 XPR1Q9UBH6 696 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 PRPF19Q9UMS4 504 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 RAP2CQ9Y3L5 183 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 COL4A5P29400 1685 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 UNCXA6NJT0 531 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 C19orf81C9J6K1 198 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 CFAP99D6REC4 459 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 PSMD12O00232 456 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 CLDN5O00501 218 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 DPYSL4O14531 572 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZBTB24O43167 697 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 AKAP10O43572 662 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZNF286BP0CG31 522 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 CKMT2P17540 419 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 NMBRP28336 390 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 ALDH3B2P48448 385 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 HSPA13P48723 471 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 NDUFV1P49821 464 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 ADAM17P78536 824 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 INCA1Q0VD86 236 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 ITGADQ13349 1161 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 POU6F1Q14863 301 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 KIZQ2M2Z5 673 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 TIGD2Q4W5G0 525 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 SPANXN3Q5MJ09 141 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZFP1Q6P2D0 407 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 GPR141Q7Z602 305 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 CTU1Q7Z7A3 348 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 FSTL5Q8N475 847 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 GOLM1Q8NBJ4 401 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 CHST13Q8NET6 341 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 SLC7A14Q8TBB6 771 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 CELF6Q96J87 481 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 CHST12Q9NRB3 414 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 SACM1LQ9NTJ5 587 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 OXSMQ9NWU1 459 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 KIAA1257Q9ULG3 409 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 AURKCQ9UQB9 309 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 IFT52Q9Y366 437 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 AP4S1Q9Y587 144 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 NME7Q9Y5B8 376 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 COPG1Q9Y678 874 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 DNAH12Q6ZR08 3092 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 ARID2Q68CP9 1835 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 KPNA4O00629 521 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 KMOO15229 486 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 GAS2O43903 313 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 GPC4O75487 556 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 MCF2P10911 925 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 AKAP5P24588 427 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 EPHX2P34913 555 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 CELF3Q5SZQ8 465 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 LIPMQ5VYY2 423 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 TTC23LQ6PF05 361 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 GPR180Q86V85 440 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 MMAAQ8IVH4 418 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 DENND6AQ8IWF6 608 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 FAM20CQ8IXL6 584 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 PGAM4Q8N0Y7 254 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 ADCY4Q8NFM4 1077 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 C12orf43Q96C57 262 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZBED3Q96IU2 234 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 ATXN3LQ9H3M9 355 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 EBF1Q9UH73 591 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 POU2F3Q9UKI9 436 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 ADAMTS5Q9UNA0 930 aa8.32□□□□□ -1.08
CDC42SE1-201ENST00000357235 C7orf72A4D263 438 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 SAC3D1A6NKF1 404 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 GOLGA8CPA6NN73 597 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 C9JVG2 144 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 E7ENX8 843 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 FAM72CH0Y354 149 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 J3QRK9 145 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 GUCY1B2O75343 617 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 JCHAINP01591 159 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 UBL4AP11441 157 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 IREB2P48200 963 aaKnown RBP8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 NUMBP49757 651 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 CREB5Q02930 508 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 BST2Q10589 180 aaKnown RBP8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 PRKAA1Q13131 559 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 FXNQ16595 210 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 GEN1Q17RS7 908 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 AGKQ53H12 422 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 FAM72AQ5TYM5 149 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 SYPL2Q5VXT5 272 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 SIGIRRQ6IA17 410 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 FAM72DQ6L9T8 149 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 RFPL4BQ6ZWI9 263 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 CYP2U1Q7Z449 544 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 FAM72BQ86X60 149 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 GRAMD2AQ8IUY3 354 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 LILRB4Q8NHJ6 448 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 FBXL8Q96CD0 374 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 NXNL1Q96CM4 212 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 ISOC1Q96CN7 298 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 PHF21BQ96EK2 531 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms