RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PAF1Q8N7H5 531 aa10.8□□□□□ -0.68
CAPN3-204ENST00000356316 DENND6BQ8NEG7 585 aa10.8□□□□□ -0.68
CAPN3-204ENST00000356316 ZNF548Q8NEK5 533 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-204ENST00000356316 MAPK15Q8TD08 544 aa10.8□□□□□ -0.68
CAPN3-204ENST00000356316 LMX1AQ8TE12 382 aa10.8□□□□□ -0.68
CAPN3-204ENST00000356316 MCEEQ96PE7 176 aa10.8□□□□□ -0.68
CAPN3-204ENST00000356316 KLF6Q99612 283 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-204ENST00000356316 CNPY3Q9BT09 278 aa10.8□□□□□ -0.68
CAPN3-204ENST00000356316 SLC13A1Q9BZW2 595 aa10.8□□□□□ -0.68
CAPN3-204ENST00000356316 SPASTQ9UBP0 616 aa10.8□□□□□ -0.68
CAPN3-204ENST00000356316 SALL4Q9UJQ4 1053 aa10.8□□□□□ -0.68
CAPN3-204ENST00000356316 MFHAS1Q9Y4C4 1052 aa10.8□□□□□ -0.68
CAPN3-204ENST00000356316 URB1O60287 2271 aaKnown RBP10.8□□□□□ -0.68
CAPN3-204ENST00000356316 CHD5Q8TDI0 1954 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 RASA4BC9J798 803 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 TOR1BO14657 336 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 TPP1O14773 563 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 FGF10O15520 208 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-204ENST00000356316 DAPK3O43293 454 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 CCP110O43303 1012 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 RASA4O43374 803 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 MMP20O60882 483 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 USP12O75317 370 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 MYF5P13349 255 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 ITPKBP27987 946 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 HTR7P34969 479 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 BLKP51451 505 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 RPL7AP62424 266 aaKnown RBP10.79□□□□□ -0.68
CAPN3-204ENST00000356316 ELP6Q0PNE2 266 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 SOWAHCQ53LP3 525 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-204ENST00000356316 LCE2DQ5TA82 110 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-204ENST00000356316 MON1BQ7L1V2 547 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 TPCN2Q8NHX9 752 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 IFI44Q8TCB0 444 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 HCAR2Q8TDS4 363 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 SCG3Q8WXD2 468 aaKnown RBP10.79□□□□□ -0.68
CAPN3-204ENST00000356316 CENPTQ96BT3 561 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 HMCESQ96FZ2 354 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 VCPIP1Q96JH7 1222 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 ERGIC2Q96RQ1 377 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 WRAP53Q9BUR4 548 aaKnown RBP10.79□□□□□ -0.68
CAPN3-204ENST00000356316 CPEB1Q9BZB8 566 aaKnown RBP10.79□□□□□ -0.68
CAPN3-204ENST00000356316 PARVAQ9NVD7 372 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 DKK3Q9UBP4 350 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 UBA2Q9UBT2 640 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-204ENST00000356316 GGT7Q9UJ14 662 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 FZD10Q9ULW2 581 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 DOLKQ9UPQ8 538 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 ITM2BQ9Y287 266 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 BPTFQ12830 3046 aa10.79□□□□□ -0.68
CAPN3-204ENST00000356316 KNTC1P50748 2209 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 TMEM110-MUSTN1A8MSY1 372 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 TMCO5BA8MYB1 307 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 AREL1O15033 823 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 TLX3O43711 291 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-204ENST00000356316 CSO75390 466 aaKnown RBP10.78□□□□□ -0.68
CAPN3-204ENST00000356316 RNF8O76064 485 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 ANXA6P08133 673 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 GIMD1P0DJR0 217 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 CTSEP14091 401 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 TIMP2P16035 220 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 HTR1BP28222 390 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 EIF4A3P38919 411 aaKnown RBP10.78□□□□□ -0.68
CAPN3-204ENST00000356316 NDST2P52849 883 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 ADKP55263 362 aaKnown RBP10.78□□□□□ -0.68
CAPN3-204ENST00000356316 TPI1P60174 286 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 PFN3P60673 137 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 PPARDQ03181 441 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 SERINC3Q13530 473 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 NR0B2Q15466 257 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 CDKN3Q16667 212 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 KLHL40Q2TBA0 621 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 DEFB133Q30KQ1 61 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 FILIP1LQ4L180 1135 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 PRRT3Q5FWE3 981 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 LRRC73Q5JTD7 316 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 PPP1R15BQ5SWA1 713 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 ESRP1Q6NXG1 681 aaKnown RBP10.78□□□□□ -0.68
CAPN3-204ENST00000356316 ERAP2Q6P179 960 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 EFL1Q7Z2Z2 1120 aaKnown RBP10.78□□□□□ -0.68
CAPN3-204ENST00000356316 DNAAF5Q86Y56 855 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 MCOLN2Q8IZK6 566 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 UMODL1-AS1Q8N2C9 162 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 SNIP1Q8TAD8 396 aaKnown RBP10.78□□□□□ -0.68
CAPN3-204ENST00000356316 UBL7Q96S82 380 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-204ENST00000356316 SUV39H2Q9H5I1 410 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 GPR27Q9NS67 375 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 APOBEC3BQ9UH17 382 aaKnown RBP10.78□□□□□ -0.68
CAPN3-204ENST00000356316 ARID1BQ8NFD5 2236 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-204ENST00000356316 ACACAQ13085 2346 aa10.78□□□□□ -0.68
CAPN3-204ENST00000356316 SHROOM3Q8TF72 1996 aa10.77□□□□□ -0.68
CAPN3-204ENST00000356316 ARHGAP42A6NI28 874 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 SMTNL1A8MU46 457 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 WASH4PA8MWX3 477 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 EIF3CLB5ME19 914 aaKnown RBP10.77□□□□□ -0.69
CAPN3-204ENST00000356316 SPINT1O43278 529 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 LZTS3O60299 673 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-204ENST00000356316 PALMO75781 387 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 MBD3O95983 291 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 MPOP05164 745 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms