RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 RPL10LQ96L21 214 aaKnown RBP17.8■□□□□ 0.44
NPAS3-202ENST00000356141 NAT9Q9BTE0 207 aa17.8■□□□□ 0.44
NPAS3-202ENST00000356141 FAM96AQ9H5X1 160 aa17.8■□□□□ 0.44
NPAS3-202ENST00000356141 PNPOQ9NVS9 261 aa17.8■□□□□ 0.44
NPAS3-202ENST00000356141 TRIOO75962 3097 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 IGLV3-10A0A075B6K4 115 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 KLHL33A6NCF5 533 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 BPGMP07738 259 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 GSTA2P09210 222 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 TROVE2P10155 538 aaKnown RBP eCLIP17.79■□□□□ 0.44
NPAS3-202ENST00000356141 HOXD9P28356 352 aaPredicted RBP17.79■□□□□ 0.44
NPAS3-202ENST00000356141 CRHR1P34998 444 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 GJA8P48165 433 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 SERPINH1P50454 418 aaKnown RBP17.79■□□□□ 0.44
NPAS3-202ENST00000356141 ZNF135P52742 658 aaPredicted RBP17.79■□□□□ 0.44
NPAS3-202ENST00000356141 PLK1P53350 603 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 FBXO48Q5FWF7 155 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 GAREM2Q75VX8 874 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 GET4Q7L5D6 327 aaPredicted RBP17.79■□□□□ 0.44
NPAS3-202ENST00000356141 RYBPQ8N488 228 aaPredicted RBP17.79■□□□□ 0.44
NPAS3-202ENST00000356141 MTBPQ96DY7 904 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 TRIM55Q9BYV6 548 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.79■□□□□ 0.44
NPAS3-202ENST00000356141 NEMP2A6NFY4 417 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 ERI2A8K979 691 aaKnown RBP17.79■□□□□ 0.44
NPAS3-202ENST00000356141 GSRP00390 522 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 ARFIP2P53365 341 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 AQP5P55064 265 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 OXCT1P55809 520 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 USP4Q13107 963 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 ZNF177Q13360 481 aaPredicted RBP17.79■□□□□ 0.44
NPAS3-202ENST00000356141 PCLAFQ15004 111 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 PIM3Q86V86 326 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 SPATS2Q86XZ4 545 aaKnown RBP17.79■□□□□ 0.44
NPAS3-202ENST00000356141 RILPQ96NA2 401 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 KIFC1Q9BW19 673 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 CINPQ9BW66 212 aaPredicted RBP17.79■□□□□ 0.44
NPAS3-202ENST00000356141 CYP4F12Q9HCS2 524 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 SLC40A1Q9NP59 571 aa17.79■□□□□ 0.44
NPAS3-202ENST00000356141 DRGXA6NNA5 263 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 GRXCR1A8MXD5 290 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 PLIN3O60664 434 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 CCNFP41002 786 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 EPHB3P54753 998 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 NCALDP61601 193 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 STX3Q13277 289 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 GRTP1Q5TC63 336 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 SNX30Q5VWJ9 437 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 ZC3HC1Q86WB0 502 aaKnown RBP17.78■□□□□ 0.44
NPAS3-202ENST00000356141 ITFG2Q969R8 447 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 TTLL2Q9BWV7 592 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 ENTPD7Q9NQZ7 604 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 MAN1C1Q9NR34 630 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 VPS28Q9UK41 221 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 RUVBL2Q9Y230 463 aaKnown RBP17.78■□□□□ 0.44
NPAS3-202ENST00000356141 CCL26Q9Y258 94 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 BACE2Q9Y5Z0 518 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 PLXNA3P51805 1871 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 ABHD14A-ACY1A0A1B0GW23 586 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 ALDH18A1P54886 795 aaKnown RBP17.78■□□□□ 0.44
NPAS3-202ENST00000356141 RCN2Q14257 317 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 NAPRTQ6XQN6 538 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 CCNJLQ8IV13 435 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 RNF168Q8IYW5 571 aaPredicted RBP17.78■□□□□ 0.44
NPAS3-202ENST00000356141 LPCAT1Q8NF37 534 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 DDI1Q8WTU0 396 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 KLHL29Q96CT2 875 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 TCEAL4Q96EI5 215 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 TCF25Q9BQ70 676 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 KDM4CQ9H3R0 1056 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 SSU72Q9NP77 194 aaKnown RBP17.78■□□□□ 0.44
NPAS3-202ENST00000356141 ZFP69BQ9UJL9 534 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 DNAJC16Q9Y2G8 782 aa17.78■□□□□ 0.44
NPAS3-202ENST00000356141 FAM95CA0A1B0GW59 222 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 PAX7P23759 505 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 HNRNPH1P31943 449 aaKnown RBP17.77■□□□□ 0.44
NPAS3-202ENST00000356141 PRAMEP78395 509 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 NTHL1P78549 312 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 SETDB1Q15047 1291 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 NXNL1Q96CM4 212 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 POLR1EQ9GZS1 481 aaKnown RBP17.77■□□□□ 0.44
NPAS3-202ENST00000356141 KCNK13Q9HB14 408 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 PPARGC1AQ9UBK2 798 aaKnown RBP17.77■□□□□ 0.44
NPAS3-202ENST00000356141 USH1CQ9Y6N9 552 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 TANC1Q9C0D5 1861 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 MIA3Q5JRA6 1907 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 PRAMEF11O60813 436 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 CTPS1P17812 591 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 TSPAN8P19075 237 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 ABL2P42684 1182 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 ARCN1P48444 511 aaKnown RBP17.77■□□□□ 0.44
NPAS3-202ENST00000356141 CDKN1CP49918 316 aaPredicted RBP17.77■□□□□ 0.44
NPAS3-202ENST00000356141 CBX2Q14781 532 aaPredicted RBP17.77■□□□□ 0.44
NPAS3-202ENST00000356141 NEPROQ6NW34 567 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 RXFP1Q9HBX9 757 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 CFAP97Q9P2B7 532 aa17.77■□□□□ 0.44
NPAS3-202ENST00000356141 UBA2Q9UBT2 640 aaPredicted RBP17.77■□□□□ 0.44
NPAS3-202ENST00000356141 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.76■□□□□ 0.43
NPAS3-202ENST00000356141 H3BNC9 293 aa17.76■□□□□ 0.43
NPAS3-202ENST00000356141 CAPN15O75808 1086 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms