RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ADSSL1Q8N142 457 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 FCRL4Q96PJ5 515 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 GANQ9H2C0 597 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 C12orf4Q9NQ89 552 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 NT5C1B-RDH14C9J2C7 533 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 SLC9A3R1O14745 358 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-201ENST00000356083 ARP10275 920 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 ACADSP16219 412 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 VPS72Q15906 364 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 PIK3R6Q5UE93 754 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 HIST1H2AAQ96QV6 131 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 DPEP2Q9H4A9 486 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 CDHR5Q9HBB8 845 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 PLGRKTQ9HBL7 147 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 TAGLN3Q9UI15 199 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 ARL5CA6NH57 179 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 SLC6A2P23975 617 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 PABPC1LQ4VXU2 614 aaKnown RBP17.37■□□□□ 0.37
COL27A1-201ENST00000356083 MEIOBQ8N635 442 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 CXorf56Q9H5V9 222 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 GGA2Q9UJY4 613 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 BARX2Q9UMQ3 279 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-201ENST00000356083 OAS3Q9Y6K5 1087 aaKnown RBP17.37■□□□□ 0.37
COL27A1-201ENST00000356083 IGKV5-2P06315 115 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 DGKAP23743 735 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 CNTFP26441 200 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 ARHGAP36Q6ZRI8 547 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 SETD9Q8NE22 299 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 DNAAF1Q8NEP3 725 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 GAD1Q99259 594 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 PARPBPQ9NWS1 579 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 CACNB4O00305 520 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-201ENST00000356083 FAM58BPP0C7Q3 252 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 MAPK7Q13164 816 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 PRMT9Q6P2P2 845 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 BHLHB9Q6PI77 547 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 CHRDL2Q6WN34 429 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 SPATA5L1Q9BVQ7 753 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 POLR1EQ9GZS1 481 aaKnown RBP17.37■□□□□ 0.37
COL27A1-201ENST00000356083 TLE6Q9H808 572 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 ADGRL3Q9HAR2 1447 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 MYPNQ86TC9 1320 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 PTPN9P43378 593 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 UGT2B15P54855 530 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 AMZ1Q400G9 498 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 MPP5Q8N3R9 675 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 VANGL1Q8TAA9 524 aaPredicted RBP17.37■□□□□ 0.37
COL27A1-201ENST00000356083 DNASE1L2Q92874 299 aa17.37■□□□□ 0.37
COL27A1-201ENST00000356083 OVOS2A0A0G2JMS6 1433 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 OVOS2A0A0J9YW53 1432 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 OVOS2Q6IE36 1432 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 DDX3XO00571 662 aaKnown RBP eCLIP17.36■□□□□ 0.37
COL27A1-201ENST00000356083 ZBTB22O15209 634 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 SLC37A4O43826 429 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 SGCBQ16585 318 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 CXCL17Q6UXB2 119 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 ABHD5Q8WTS1 349 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 HCN3Q9P1Z3 774 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 ERGIC3Q9Y282 383 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 ELFN1P0C7U0 828 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 ANKS1AQ92625 1134 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 EFHD2Q96C19 240 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-201ENST00000356083 C2orf49Q9BVC5 232 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-201ENST00000356083 TBC1D10AQ9BXI6 508 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 ZBTB11O95625 1053 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-201ENST00000356083 PTPN11Q06124 597 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-201ENST00000356083 GALNT3Q14435 633 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 CFAP52Q8N1V2 620 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 PNPT1Q8TCS8 783 aaKnown RBP17.36■□□□□ 0.37
COL27A1-201ENST00000356083 S100ZQ8WXG8 99 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 GAL3ST4Q96RP7 486 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 SPATC1LQ9H0A9 340 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 CD302Q8IX05 232 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 ZFP28Q8NHY6 868 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 MCMBPQ9BTE3 642 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 CDH7Q9ULB5 785 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 VPS4AQ9UN37 437 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 CCL16O15467 120 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 FNBP1LQ5T0N5 605 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 OR14C36Q8NHC7 312 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 GDPD5Q8WTR4 605 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 CDRT15Q96T59 188 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 RIT2Q99578 217 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 ACE2Q9BYF1 805 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-201ENST00000356083 DUSP10Q9Y6W6 482 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 A0A1W2PQ72 361 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 TFECO14948 347 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-201ENST00000356083 PEX14O75381 377 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 CAPZA1P52907 286 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 SERPINB11Q96P15 392 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 ISCUQ9H1K1 167 aa17.36■□□□□ 0.37
COL27A1-201ENST00000356083 MAGEB16A2A368 324 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 GJA8P48165 433 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 ACLYP53396 1101 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 LRP8Q14114 963 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 C9orf64Q5T6V5 341 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 PHYKPLQ8IUZ5 450 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 CRAMP1Q96RY5 1269 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 IFT52Q9Y366 437 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms