RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 TRAFD1O14545 582 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 MAP3K13O43283 966 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 MT-CYBP00156 380 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 IGLV3-19P01714 112 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 PRKCGP05129 697 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 PRLRP16471 622 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 ITIH2P19823 946 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 NFKB1P19838 968 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 SERPINA4P29622 427 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 CD6P30203 668 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 PIP5KL1Q5T9C9 394 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 ALG1LQ6GMV1 187 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 USP30Q70CQ3 517 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 ERN2Q76MJ5 926 aaKnown RBP18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 CREG2Q8IUH2 290 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 TAB3Q8N5C8 712 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 PAF1Q8N7H5 531 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 OR14C36Q8NHC7 312 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 MAIP1Q8WWC4 291 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 ZNF592Q92610 1267 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 ATOH1Q92858 354 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 NKD2Q969F2 451 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 PPP1R16AQ96I34 528 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 SPACA7Q96KW9 195 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 TUBGCP5Q96RT8 1024 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 GPR174Q9BXC1 333 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 WSB2Q9NYS7 404 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 HCN4Q9Y3Q4 1203 aa18.06■□□□□ 0.48
PDLIM7-202ENST00000355841 NUMA1Q14980 2115 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 LILRB5O75023 590 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 MAPK8P45983 427 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 SEMG2Q02383 582 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 LPAL2Q16609 132 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 ANKRD20A2Q5SQ80 823 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 CFAP58Q5T655 872 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 ANKRD20A1Q5TYW2 823 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 ANKRD20A3Q5VUR7 823 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 FBXL19Q6PCT2 694 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 CEP68Q76N32 757 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 KDELC2Q7Z4H8 507 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 TTC7BQ86TV6 843 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 PRPF39Q86UA1 669 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 TMEFF1Q8IYR6 380 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 IMP4Q96G21 291 aaKnown RBP18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 ZNF641Q96N77 438 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 VAT1Q99536 393 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 FERMT1Q9BQL6 677 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 FRMD8P1Q9BZ68 369 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 BTBD1Q9H0C5 482 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 HAUS2Q9NVX0 235 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 ITM2BQ9Y287 266 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 RAI2Q9Y5P3 530 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 FRYLO94915 3013 aa18.05■□□□□ 0.48
PDLIM7-202ENST00000355841 PDE2AO00408 941 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 IFNB1P01574 187 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 PDHA1P08559 390 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 SERPINF2P08697 491 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 ADRB3P13945 408 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 ETS1P14921 441 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 TIMP2P16035 220 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 ABL2P42684 1182 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 PTPN5P54829 565 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 ADPRHP54922 357 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 TAS2R38P59533 333 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 SKOR1P84550 965 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 RPL6Q02878 288 aaKnown RBP18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 GRM3Q14832 879 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 PRR23BQ6ZRT6 265 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 KBTBD6Q86V97 674 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 ZSCAN30Q86W11 494 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 GLIS1Q8NBF1 620 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 SPATA13Q96N96 652 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 NAP1L3Q99457 506 aaPredicted RBP18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 HDAC8Q9BY41 377 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 SLC25A51Q9H1U9 297 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 RSPH14Q9UHP6 348 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 GGT7Q9UJ14 662 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 FZD4Q9ULV1 537 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 CHKBQ9Y259 395 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 PCDHB9Q9Y5E1 797 aa18.04■□□□□ 0.48
PDLIM7-202ENST00000355841 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 STK10O94804 968 aaKnown RBP18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 NEK3P51956 506 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 SIM2Q14190 667 aaPredicted RBP18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 PTPRRQ15256 657 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 PCSK7Q16549 785 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 TTC27Q6P3X3 843 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 ARMCX6Q7L4S7 300 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 MAGOHBQ96A72 148 aaKnown RBP18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 SMIM14Q96QK8 99 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 C6orf106Q9H6K1 298 aaPredicted RBP18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 TRHDEQ9UKU6 1024 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 ABCA7Q8IZY2 2146 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 HTRA2O43464 458 aaPredicted RBP18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 NDUFS2O75306 463 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 PMPCBO75439 489 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 SEMA4FO95754 770 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 ITGAVP06756 1048 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 ZSCAN5DPP0CG00 497 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms