RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 MEA1Q16626 185 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 ITPRIPL2Q3MIP1 535 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 ACSM2BQ68CK6 577 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 MBLAC2Q68D91 279 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 DAW1Q8N136 415 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 MIER2Q8N344 545 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 HDAC10Q969S8 669 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 FUCA2Q9BTY2 467 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 PSME2Q9UL46 239 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 SNX10Q9Y5X0 201 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 NUP188Q5SRE5 1749 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 H0Y858 1186 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 HOXB2P14652 356 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 RPS24P62847 133 aaKnown RBP9.79□□□□□ -0.84
GABPA-201ENST00000354828 ALDH6A1Q02252 535 aaKnown RBP9.79□□□□□ -0.84
GABPA-201ENST00000354828 RGS1Q08116 209 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 ATP6AP1LQ52LC2 224 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 USP39Q53GS9 565 aaKnown RBP9.79□□□□□ -0.84
GABPA-201ENST00000354828 FNBP1LQ5T0N5 605 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 SEL1L3Q68CR1 1132 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 ARHGAP17Q68EM7 881 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 CHMP1BQ7LBR1 199 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 HORMAD1Q86X24 394 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 MMAAQ8IVH4 418 aaKnown RBP9.79□□□□□ -0.84
GABPA-201ENST00000354828 CLYBLQ8N0X4 340 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 OR4L1Q8NH43 312 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 MTFMTQ96DP5 389 aaKnown RBP9.79□□□□□ -0.84
GABPA-201ENST00000354828 PPP1R10Q96QC0 940 aaKnown RBP9.79□□□□□ -0.84
GABPA-201ENST00000354828 SLC38A3Q99624 504 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 NSUN3Q9H649 340 aaKnown RBP9.79□□□□□ -0.84
GABPA-201ENST00000354828 PTPRHQ9HD43 1115 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 POLG2Q9UHN1 485 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 SLC24A2Q9UI40 661 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 CDV3Q9UKY7 258 aaKnown RBP9.79□□□□□ -0.84
GABPA-201ENST00000354828 PCDHGC4Q9Y5F7 938 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 hCG_1818297A0A087WSY0 165 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 C9IYK1 514 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 CNMDO75829 334 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 PPP2R1BP30154 601 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 CSKP41240 450 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 ERFP50548 548 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 N4BP2L1Q5TBK1 243 aaPredicted RBP9.79□□□□□ -0.84
GABPA-201ENST00000354828 CLEC20AQ6ZU45 233 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 TNIP2Q8NFZ5 429 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 CMTM5Q96DZ9 223 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 ZBED3Q96IU2 234 aaPredicted RBP9.79□□□□□ -0.84
GABPA-201ENST00000354828 NECTIN4Q96NY8 510 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 PCDHB18PQ96TA0 734 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 HGH1Q9BTY7 390 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 DPY30Q9C005 99 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 SMG9Q9H0W8 520 aaKnown RBP9.79□□□□□ -0.84
GABPA-201ENST00000354828 PCDHGC3Q9UN70 934 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 ARL2BPQ9Y2Y0 163 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 ITGB4P16144 1822 aa9.79□□□□□ -0.84
GABPA-201ENST00000354828 MTMR11A4FU01 709 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 KRT87PA6NCN2 255 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 ADAMTS3O15072 1205 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 ZBTB22O15209 634 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 CHADO15335 359 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 ECT2LQ008S8 904 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 OVGP1Q12889 678 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 ADGRF1Q5T601 910 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 RNF19BQ6ZMZ0 732 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 OR9Q1Q8NGQ5 310 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 SETD7Q8WTS6 366 aaKnown RBP9.78□□□□□ -0.84
GABPA-201ENST00000354828 STK32AQ8WU08 396 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 SLC22A17Q8WUG5 538 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 HMCESQ96FZ2 354 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 KCTD15Q96SI1 283 aaPredicted RBP9.78□□□□□ -0.84
GABPA-201ENST00000354828 VPS45Q9NRW7 570 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 FLRT1Q9NZU1 646 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 ADAM21Q9UKJ8 722 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 PHF24Q9UPV7 400 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 TBC1D30Q9Y2I9 924 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 MTO1Q9Y2Z2 717 aaKnown RBP9.78□□□□□ -0.84
GABPA-201ENST00000354828 NHSQ6T4R5 1651 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 H3BQ06 376 aaPredicted RBP9.78□□□□□ -0.84
GABPA-201ENST00000354828 LAMTOR5O43504 91 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 HS6ST1O60243 411 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 RHOP08100 348 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 PGM1P36871 562 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 ASPAP45381 313 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 CCR4P51679 360 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 DNAJC3Q13217 504 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 C16orf89Q6UX73 402 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 UNC5AQ6ZN44 842 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 STAG3L4Q8TBR4 150 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 BAP1Q92560 729 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 EMID1Q96A84 441 aaPredicted RBP9.78□□□□□ -0.84
GABPA-201ENST00000354828 NRBF2Q96F24 287 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 MCCC1Q96RQ3 725 aaPredicted RBP9.78□□□□□ -0.84
GABPA-201ENST00000354828 PCYT2Q99447 389 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 ARMC7Q9H6L4 198 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 ELAC1Q9H777 363 aaKnown RBP9.78□□□□□ -0.84
GABPA-201ENST00000354828 NMUR1Q9HB89 426 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 INTS7Q9NVH2 962 aaKnown RBP9.78□□□□□ -0.84
GABPA-201ENST00000354828 TNPO3Q9Y5L0 923 aaKnown RBP9.78□□□□□ -0.84
GABPA-201ENST00000354828 CPED1A4D0V7 1026 aa9.78□□□□□ -0.84
GABPA-201ENST00000354828 PAPSS1O43252 624 aaPredicted RBP9.78□□□□□ -0.84
GABPA-201ENST00000354828 OR10H2O60403 315 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms