RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 FBXW8Q8N3Y1 598 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 JADE3Q92613 823 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 CDKL2Q92772 493 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 HAPLN3Q96S86 360 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 CEP41Q9BYV8 373 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 OR12D3Q9UGF7 316 aa8.71□□□□□ -1.02
TRIM55-204ENST00000353317 PRRC2BQ5JSZ5 2229 aaKnown RBP8.71□□□□□ -1.02
TRIM55-204ENST00000353317 MTCL1Q9Y4B5 1905 aaKnown RBP8.71□□□□□ -1.02
TRIM55-204ENST00000353317 KCNU1A8MYU2 1149 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 LRIG2O94898 1065 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 F7P08709 466 aaPredicted RBP8.7□□□□□ -1.02
TRIM55-204ENST00000353317 PABPC4LP0CB38 370 aaKnown RBP8.7□□□□□ -1.02
TRIM55-204ENST00000353317 ERVK-10P10266 1014 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 MYL4P12829 197 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 MLNP12872 115 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 ERCC2P18074 760 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 TYK2P29597 1187 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 HARS2P49590 506 aaKnown RBP8.7□□□□□ -1.02
TRIM55-204ENST00000353317 MTTPP55157 894 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 CUL3Q13618 768 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 MMEL1Q495T6 779 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 C9orf50Q5SZB4 431 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 LRRC8BQ6P9F7 803 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 CES3Q6UWW8 571 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 CMC1Q7Z7K0 106 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 KBTBD6Q86V97 674 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 ZNF781Q8N8C0 355 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 CLP1Q92989 425 aaKnown RBP8.7□□□□□ -1.02
TRIM55-204ENST00000353317 FBXO32Q969P5 355 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 NTAN1Q96AB6 310 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 SPATA17Q96L03 361 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 OLFM3Q96PB7 478 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 SLC9A7Q96T83 725 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 SIK2Q9H0K1 926 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 SMOC2Q9H3U7 446 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 COG4Q9H9E3 785 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.7□□□□□ -1.02
TRIM55-204ENST00000353317 ARHGEF38Q9NXL2 777 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 ATG2AQ2TAZ0 1938 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 NOTCH4Q99466 2003 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 PRUNE2Q8WUY3 3088 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 A0A0A0MRY4 1105 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 E9PBE3 544 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 KLHL41O60662 606 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 PAGE1O75459 146 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 STK10O94804 968 aaKnown RBP8.7□□□□□ -1.02
TRIM55-204ENST00000353317 CNPP09543 421 aaKnown RBP8.7□□□□□ -1.02
TRIM55-204ENST00000353317 ZDHHC11BP0C7U3 371 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 ZFXP17010 805 aaPredicted RBP8.7□□□□□ -1.02
TRIM55-204ENST00000353317 LAG3P18627 525 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 PGAM1P18669 254 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 EFEMP1Q12805 493 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 PDK3Q15120 406 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 INSCQ1MX18 579 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 SLC9B1Q4ZJI4 515 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 NAPRTQ6XQN6 538 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 BEND5Q7L4P6 421 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 TMEM150AQ86TG1 271 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 SATL1Q86VE3 508 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 MIB1Q86YT6 1006 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 HERC6Q8IVU3 1022 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 PLD6Q8N2A8 252 aaKnown RBP8.7□□□□□ -1.02
TRIM55-204ENST00000353317 WBP2Q969T9 261 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 SLC39A13Q96H72 371 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 FCRL2Q96LA5 508 aaPredicted RBP8.7□□□□□ -1.02
TRIM55-204ENST00000353317 SPATA13Q96N96 652 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 EPAS1Q99814 870 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 HERC2P3Q9BVR0 1158 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 VCX3BQ9H321 246 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 SYBUQ9NX95 663 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 PACSIN3Q9UKS6 424 aa8.7□□□□□ -1.02
TRIM55-204ENST00000353317 HIDE1A8MVS5 230 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 EEF2KO00418 725 aaKnown RBP8.69□□□□□ -1.02
TRIM55-204ENST00000353317 CASQ2O14958 399 aaPredicted RBP8.69□□□□□ -1.02
TRIM55-204ENST00000353317 MOCS2O96007 188 aaPredicted RBP8.69□□□□□ -1.02
TRIM55-204ENST00000353317 SRGAP2BP0DMP2 458 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 COX4I1P13073 169 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 CPA3P15088 417 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 XIAPP98170 497 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 DYNC1I2Q13409 638 aaKnown RBP8.69□□□□□ -1.02
TRIM55-204ENST00000353317 PPIGQ13427 754 aaKnown RBP eCLIP8.69□□□□□ -1.02
TRIM55-204ENST00000353317 OLIG2Q13516 323 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 LAMB3Q13751 1172 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 CAMK1Q14012 370 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 PIK3R6Q5UE93 754 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 UGT2A3Q6UWM9 527 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 RNF217Q8TC41 542 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 MAPK15Q8TD08 544 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 ATXN7L3BQ96GX2 97 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 C17orf80Q9BSJ5 609 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 RNF38Q9H0F5 515 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 ZBP1Q9H171 429 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 FBXO44Q9H4M3 255 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 FAM96AQ9H5X1 160 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 SNX15Q9NRS6 342 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 AFF4Q9UHB7 1163 aaKnown RBP8.69□□□□□ -1.02
TRIM55-204ENST00000353317 ARHGAP26Q9UNA1 814 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 MYOFQ9NZM1 2061 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 CAPN8A6NHC0 703 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 TXNDC9O14530 226 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms