RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ZNF839A8K0R7 811 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 C1QTNF3-AMACRE9PGA6 284 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 USP12O75317 370 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 CCNHP51946 323 aaPredicted RBP12.27□□□□□ -0.45
SMAD9-201ENST00000350148 CST9Q5W186 159 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 TIFAQ96CG3 184 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 POLE3Q9NRF9 147 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 MPP6Q9NZW5 540 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 ZBTB42B2RXF5 422 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 C9IYK1 514 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 CHRNA1P02708 482 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 RPN2P04844 631 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 CFHP08603 1231 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 IL1R2P27930 398 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 MAPK9P45984 424 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 IL2P60568 153 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 OASLQ15646 514 aaKnown RBP12.27□□□□□ -0.45
SMAD9-201ENST00000350148 SUSD6Q92537 303 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 CCDC124Q96CT7 223 aaKnown RBP12.27□□□□□ -0.45
SMAD9-201ENST00000350148 RBBP8Q99708 897 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 MMADHCQ9H3L0 296 aaPredicted RBP12.27□□□□□ -0.45
SMAD9-201ENST00000350148 GJD2Q9UKL4 321 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 FBXO5Q9UKT4 447 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 SOX13Q9UN79 622 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 ECM29Q5VYK3 1845 aa12.27□□□□□ -0.45
SMAD9-201ENST00000350148 TXNDC11Q6PKC3 985 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 ZDHHC24Q6UX98 284 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 STYXQ8WUJ0 223 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 TLCD1Q96CP7 247 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 CRTAC1Q9NQ79 661 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 COL4A1P02462 1669 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 MYH7BA7E2Y1 1941 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 LOXHD1Q8IVV2 1947 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 GOLGA8TH3BQL2 631 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 SOD2P04179 222 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 PTPN4P29074 926 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 CRHR1P34998 444 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 CMTR2Q8IYT2 770 aaKnown RBP12.26□□□□□ -0.45
SMAD9-201ENST00000350148 NCLNQ969V3 563 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 SGF29Q96ES7 293 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 C1orf74Q96LT6 269 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 CFAP97Q9P2B7 532 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 TMEM189-UBE2V1I3L0A0 370 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 MAGEC1O60732 1142 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 RPA3P35244 121 aaPredicted RBP12.26□□□□□ -0.45
SMAD9-201ENST00000350148 SLC11A1P49279 550 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 UBXN11Q5T124 520 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 GPR158Q5T848 1215 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 FAM46CQ5VWP2 391 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 MARK2Q7KZI7 788 aaKnown RBP12.26□□□□□ -0.45
SMAD9-201ENST00000350148 CHST9Q7L1S5 443 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 SCML4Q8N228 414 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 NDRG1Q92597 394 aaKnown RBP12.26□□□□□ -0.45
SMAD9-201ENST00000350148 SAMD11Q96NU1 681 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 AGO3Q9H9G7 860 aaKnown RBP12.26□□□□□ -0.45
SMAD9-201ENST00000350148 AGPSO00116 658 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 RPP40O75818 363 aaKnown RBP12.26□□□□□ -0.45
SMAD9-201ENST00000350148 KRT6AP02538 564 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 KRT6BP04259 564 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 KRT6CP48668 564 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 OGDHQ02218 1023 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 FNDC3BQ53EP0 1204 aaKnown RBP12.26□□□□□ -0.45
SMAD9-201ENST00000350148 MARCH8Q5T0T0 291 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 NCBP2-AS2Q69YL0 99 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 TRAF7Q6Q0C0 670 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 PIWIL4Q7Z3Z4 852 aaKnown RBP12.26□□□□□ -0.45
SMAD9-201ENST00000350148 NAT8LQ8N9F0 302 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 ANKLE1Q8NAG6 615 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 SLC39A8Q9C0K1 460 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 NEUROG2Q9H2A3 272 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 POLG2Q9UHN1 485 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 LNPEPQ9UIQ6 1025 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 DYRK1BQ9Y463 629 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 BACE2Q9Y5Z0 518 aa12.26□□□□□ -0.45
SMAD9-201ENST00000350148 FSBPO95073 299 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 TRIM16O95361 564 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 NFATC1O95644 943 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 APOA1P02647 267 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 SPDYAQ5MJ70 313 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 CERS6Q6ZMG9 384 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 EGFL6Q8IUX8 553 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 TRMOQ9BU70 441 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 PCDHB1Q9Y5F3 818 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.25□□□□□ -0.45
SMAD9-201ENST00000350148 KATNA1O75449 491 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 E2F6O75461 281 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 NQO1P15559 274 aaKnown RBP12.25□□□□□ -0.45
SMAD9-201ENST00000350148 GLRBP48167 497 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 OVGP1Q12889 678 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 PRMT9Q6P2P2 845 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 CES3Q6UWW8 571 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 UBR7Q8N806 425 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 RIN3Q8TB24 985 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 MCOLN3Q8TDD5 553 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 CLEC4CQ8WTT0 213 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 FAM126AQ9BYI3 521 aaPredicted RBP12.25□□□□□ -0.45
SMAD9-201ENST00000350148 CASS4Q9NQ75 786 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 TCF7L2Q9NQB0 619 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 FLRT1Q9NZU1 646 aa12.25□□□□□ -0.45
SMAD9-201ENST00000350148 MAPRE3Q9UPY8 281 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms