RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SLC12A1Q13621 1099 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 HIST2H2ACQ16777 129 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-203ENST00000349748 NXNL2Q5VZ03 156 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 NXNQ6DKJ4 435 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 TRMT10BQ6PF06 316 aaKnown RBP10.75□□□□□ -0.69
CAPN3-203ENST00000349748 GADL1Q6ZQY3 521 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 BBS12Q6ZW61 710 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 PAGE2Q7Z2X7 111 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 UNC45BQ8IWX7 931 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 EID3Q8N140 333 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 IL17RDQ8NFM7 739 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 TTLQ8NG68 377 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 ELMO1Q92556 727 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 SEPT8Q92599 483 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 GTF2H4Q92759 462 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 C11orf70Q9BRQ4 267 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 BBS2Q9BXC9 721 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 SLC17A6Q9P2U8 582 aa10.75□□□□□ -0.69
CAPN3-203ENST00000349748 PRORSD1PA6NEY8 169 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 USP17L5A8MUK1 530 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 GPR25O00155 361 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 TSPAN4O14817 238 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 SGTAO43765 313 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 SEC24AO95486 1093 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 FAM86B2P0C5J1 330 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 TFE3P19532 575 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 MMP8P22894 467 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 SERPINH1P50454 418 aaKnown RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 PPP5CP53041 499 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 AP2S1P53680 142 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 PITRM1Q5JRX3 1037 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 TOR2AQ5JU69 321 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 CCNYL2Q5T2Q4 361 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 SPOCD1Q6ZMY3 1216 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 C12orf56Q8IXR9 622 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 COLGALT2Q8IYK4 626 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 TDRD5Q8NAT2 981 aaKnown RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 NKD2Q969F2 451 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 HSFY1Q96LI6 401 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 UHRF1Q96T88 793 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 SLA2Q9H6Q3 261 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 EFCAB1Q9HAE3 211 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 PLAC1Q9HBJ0 212 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 FBXO8Q9NRD0 319 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 ZNF277Q9NRM2 450 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 FZD1Q9UP38 647 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 IRS2Q9Y4H2 1338 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 TYW5A2RUC4 315 aaKnown RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 OR5K3A6NET4 321 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 ABCB7O75027 752 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 CPNE3O75131 537 aaKnown RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 ZNF254O75437 659 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 TP53P04637 393 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 ADORA2AP29274 412 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 GARSP41250 739 aaKnown RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 NLRP11P59045 1033 aaKnown RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 PSME3P61289 254 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 VBP1P61758 197 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 IKQ13123 557 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 NAB1Q13506 487 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 COL19A1Q14993 1142 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 CYBRD1Q53TN4 286 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 YIF1BQ5BJH7 314 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 TREML2Q5T2D2 321 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 LGSNQ5TDP6 509 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 BROXQ5VW32 411 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 GDPD3Q7L5L3 318 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 TFAP2DQ7Z6R9 452 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 LINC00523Q86TU6 105 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 SFRP1Q8N474 314 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 AFAP1L2Q8N4X5 818 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 DHRSXQ8N5I4 330 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 ACTL9Q8TC94 416 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 RSAD2Q8WXG1 361 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 TTC9Q92623 222 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 PIM2Q9P1W9 311 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 TCRBV3S1A0A5B6 114 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 CTDSP2O14595 271 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 PAPSS1O43252 624 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 PLIN3O60664 434 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 INMTO95050 263 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 JUNBP17275 347 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 TBXAS1P24557 533 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 VASPP50552 380 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 ADPRMQ3LIE5 342 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 ERMP1Q7Z2K6 904 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 OR7A2PQ8NGA2 310 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 LRRC20Q8TCA0 184 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 SHC3Q92529 594 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 SEMA4DQ92854 862 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 ST6GAL2Q96JF0 529 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 CNDP1Q96KN2 507 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 KCTD14Q9BQ13 255 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-203ENST00000349748 IGSF5Q9NSI5 407 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 ZNF358Q9NW07 568 aa10.74□□□□□ -0.69
CAPN3-203ENST00000349748 NAV1Q8NEY1 1877 aa10.73□□□□□ -0.69
CAPN3-203ENST00000349748 TCAF2A6NFQ2 919 aa10.73□□□□□ -0.69
CAPN3-203ENST00000349748 KCNU1A8MYU2 1149 aa10.73□□□□□ -0.69
CAPN3-203ENST00000349748 PLK4O00444 970 aa10.73□□□□□ -0.69
CAPN3-203ENST00000349748 FAM13AO94988 1023 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms