RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 CYGBQ8WWM9 190 aa18.83■□□□□ 0.61
SCARF1-202ENST00000348987 STARD8Q92502 1023 aa18.83■□□□□ 0.61
SCARF1-202ENST00000348987 PBXIP1Q96AQ6 731 aa18.83■□□□□ 0.61
SCARF1-202ENST00000348987 TCF12Q99081 682 aa18.83■□□□□ 0.61
SCARF1-202ENST00000348987 GJD2Q9UKL4 321 aa18.83■□□□□ 0.61
SCARF1-202ENST00000348987 TRIM64A6NGJ6 449 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 DYNC1LI2O43237 492 aaPredicted RBP18.83■□□□□ 0.6
SCARF1-202ENST00000348987 MATN1P21941 496 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 TTKP33981 857 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 SPRP35270 261 aaPredicted RBP18.83■□□□□ 0.6
SCARF1-202ENST00000348987 GRIA3P42263 894 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 TNFAIP2Q03169 654 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 PRKAA1Q13131 559 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 OLIG2Q13516 323 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 C6orf10Q5SRN2 563 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 CLEC14AQ86T13 490 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 ERO1BQ86YB8 467 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 LINC01465Q8N7H1 131 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 COLGALT1Q8NBJ5 622 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 URGCPQ8TCY9 931 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 ACE2Q9BYF1 805 aaPredicted RBP18.83■□□□□ 0.6
SCARF1-202ENST00000348987 OTOFQ9HC10 1997 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 ATAD3AQ9NVI7 634 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 RIC8BQ9NVN3 520 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 GIT1Q9Y2X7 761 aa18.83■□□□□ 0.6
SCARF1-202ENST00000348987 TRIM64BA6NI03 449 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 AQP9O43315 295 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 TPD52L2O43399 206 aaKnown RBP18.82■□□□□ 0.6
SCARF1-202ENST00000348987 H2AFYO75367 372 aaKnown RBP18.82■□□□□ 0.6
SCARF1-202ENST00000348987 POLBP06746 335 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 BMP2P12643 396 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 MLNP12872 115 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 JAK1P23458 1154 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 GJA5P36382 358 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 GLRBP48167 497 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 MLLT10P55197 1068 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 TNK2Q07912 1038 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 TTLL4Q14679 1199 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 PITRM1Q5JRX3 1037 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 DEPDC1Q5TB30 811 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 THOC7Q6I9Y2 204 aaKnown RBP18.82■□□□□ 0.6
SCARF1-202ENST00000348987 SNX31Q8N9S9 440 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 AFG1LQ8WV93 481 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 TOP1MTQ969P6 601 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 C18orf25Q96B23 403 aaPredicted RBP18.82■□□□□ 0.6
SCARF1-202ENST00000348987 MTG1Q9BT17 334 aaPredicted RBP18.82■□□□□ 0.6
SCARF1-202ENST00000348987 TASP1Q9H6P5 420 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 ZNF408Q9H9D4 720 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 CACNA2D2Q9NY47 1150 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 UTP6Q9NYH9 597 aaKnown RBP18.82■□□□□ 0.6
SCARF1-202ENST00000348987 HESX1Q9UBX0 185 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 KCNH1O95259 989 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 YBX3P16989 372 aaKnown RBP eCLIP18.82■□□□□ 0.6
SCARF1-202ENST00000348987 CCNA2P20248 432 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 PSMD8P48556 350 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 LIMK2P53671 638 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 LRP8Q14114 963 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 SOWAHAQ2M3V2 549 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 LIPMQ5VYY2 423 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 FAM117BQ6P1L5 589 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 ZNF354CQ86Y25 554 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 IFNLR1Q8IU57 520 aaPredicted RBP18.82■□□□□ 0.6
SCARF1-202ENST00000348987 EPHX4Q8IUS5 362 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 CCDC185Q8N715 623 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 PCYOX1LQ8NBM8 494 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 DAPK2Q9UIK4 370 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 AURKCQ9UQB9 309 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 SLC30A1Q9Y6M5 507 aa18.82■□□□□ 0.6
SCARF1-202ENST00000348987 TPST1O60507 370 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 SLC25A27O95847 323 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 PABPC1P11940 636 aaKnown RBP18.81■□□□□ 0.6
SCARF1-202ENST00000348987 SAT1P21673 171 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 TRAP1Q12931 704 aaKnown RBP18.81■□□□□ 0.6
SCARF1-202ENST00000348987 DGKDQ16760 1214 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 LDLRAP1Q5SW96 308 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 CAMK1DQ8IU85 385 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 LSMEM2Q8N112 164 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 MFSD2AQ8NA29 543 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 NDRG1Q92597 394 aaKnown RBP18.81■□□□□ 0.6
SCARF1-202ENST00000348987 ISL2Q96A47 359 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 MRPL40Q9NQ50 206 aaKnown RBP18.81■□□□□ 0.6
SCARF1-202ENST00000348987 TMPRSS4Q9NRS4 437 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 RNF103-CHMP3A0A140T963 221 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 DPYSL4O14531 572 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 KDM1AO60341 852 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 NOL3O60936 208 aaKnown RBP18.81■□□□□ 0.6
SCARF1-202ENST00000348987 SBK3P0C264 359 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 SLC36A3Q495N2 470 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 ARMCX2Q7L311 632 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 ERMP1Q7Z2K6 904 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 BTLAQ7Z6A9 289 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 ANKRD13AQ8IZ07 590 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 TERB1Q8NA31 727 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 HTR3CQ8WXA8 447 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 DUS3LQ96G46 650 aaKnown RBP18.81■□□□□ 0.6
SCARF1-202ENST00000348987 LGMNQ99538 433 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 ZNF670Q9BS34 389 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 TDRD1Q9BXT4 1180 aaKnown RBP18.81■□□□□ 0.6
SCARF1-202ENST00000348987 ZFYVE28Q9HCC9 887 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 SPAG4Q9NPE6 437 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms