RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 DYNC1I2Q13409 638 aaKnown RBP10.98□□□□□ -0.65
CLCN6-202ENST00000346436 SPATA31D4Q6ZUB0 917 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 TAF8Q7Z7C8 310 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 SETD7Q8WTS6 366 aaKnown RBP10.98□□□□□ -0.65
CLCN6-202ENST00000346436 INPP5DQ92835 1189 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 ZFYVE19Q96K21 471 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 CPXM1Q96SM3 734 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 MLPHQ9BV36 600 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-202ENST00000346436 UNC93B1Q9H1C4 597 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 SLC27A5Q9Y2P5 690 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 TMEM114B3SHH9 223 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 FPGTO14772 594 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 ABHD2P08910 425 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 CNPP09543 421 aaKnown RBP10.98□□□□□ -0.65
CLCN6-202ENST00000346436 IMPDH2P12268 514 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 TYMPP19971 482 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 HLA-DPA1P20036 260 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 SLC6A3Q01959 620 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 AASDHQ4L235 1098 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-202ENST00000346436 DEFB106AQ8N104 65 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 GLIS1Q8NBF1 620 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 CLEC4DQ8WXI8 215 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 CLPTM1LQ96KA5 538 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 STRADBQ9C0K7 418 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 TLR9Q9NR96 1032 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 ACTL7BQ9Y614 415 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 C4AP0C0L4 1744 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 C4BP0C0L5 1744 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 VSTM5A8MXK1 200 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 RNF103O00237 685 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 CDH17Q12864 832 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 POU6F1Q14863 301 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 PIGWQ7Z7B1 504 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 DACH2Q96NX9 599 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 FAIM2Q9BWQ8 316 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 CCDC90BQ9GZT6 254 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 CAAP1Q9H8G2 361 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 DNAJC11Q9NVH1 559 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 MPP6Q9NZW5 540 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 MMP8P22894 467 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 PSMD8P48556 350 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 TXNRD3NBQ6F5E7 133 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 CRELD2Q6UXH1 353 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-202ENST00000346436 B4GALNT2Q8NHY0 566 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 CYGBQ8WWM9 190 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 ZNF516Q92618 1163 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 HAPLN3Q96S86 360 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 ACO2Q99798 780 aaKnown RBP10.98□□□□□ -0.65
CLCN6-202ENST00000346436 SNRNP25Q9BV90 132 aaKnown RBP10.98□□□□□ -0.65
CLCN6-202ENST00000346436 ACSS3Q9H6R3 686 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 SPATA6Q9NWH7 488 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-202ENST00000346436 PNMA8BQ9ULN7 279 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-202ENST00000346436 TRPC5OSA6NMA1 111 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 ISM1B1AKI9 464 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 C9J4A7 227 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 SLC10A3P09131 477 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 IDSP22304 550 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 NTSP30990 170 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 VEGFBP49765 207 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 RPP38P78345 283 aaKnown RBP10.98□□□□□ -0.65
CLCN6-202ENST00000346436 CCINQ13939 588 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 ACAP1Q15027 740 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 RAP1GAP2Q684P5 730 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 PLEKHA7Q6IQ23 1121 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 WNT8BQ93098 351 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 RAD9AQ99638 391 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 TMEM175Q9BSA9 504 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 B3GNT5Q9BYG0 378 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 TKTL2Q9H0I9 626 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 PAPOLBQ9NRJ5 636 aaKnown RBP10.98□□□□□ -0.65
CLCN6-202ENST00000346436 MAPRE3Q9UPY8 281 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 PCDHB3Q9Y5E6 796 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 MYH15Q9Y2K3 1946 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 NFKBIEO00221 500 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 BAIAP3O94812 1187 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 SERPINB8P50452 374 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 COPZ1P61923 177 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 CAP1Q01518 475 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 PLOD1Q02809 727 aaPredicted RBP10.97□□□□□ -0.65
CLCN6-202ENST00000346436 TJAP1Q5JTD0 557 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 CHST9Q7L1S5 443 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.97□□□□□ -0.65
CLCN6-202ENST00000346436 DIS3LQ8TF46 1054 aaKnown RBP10.97□□□□□ -0.65
CLCN6-202ENST00000346436 GDPD5Q8WTR4 605 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 KATNA1O75449 491 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 DGKAP23743 735 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 HOXC12P31275 282 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 CCR3P51677 355 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 PKNOX1P55347 436 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 MRPS15P82914 257 aaKnown RBP10.97□□□□□ -0.65
CLCN6-202ENST00000346436 ACAP2Q15057 778 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 TFAP2BQ92481 460 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 CPT1BQ92523 772 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 LGMNQ99538 433 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 PTPRHQ9HD43 1115 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 SAR1AQ9NR31 198 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 THAP1Q9NVV9 213 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 USP1O94782 785 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 EIF2S1P05198 315 aaKnown RBP10.97□□□□□ -0.65
CLCN6-202ENST00000346436 YBX3P16989 372 aaKnown RBP eCLIP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms