RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 MFSD3Q96ES6 412 aa9.36□□□□□ -0.91
ATG4A-202ENST00000345734 CEP295NLQ96MC4 621 aa9.36□□□□□ -0.91
ATG4A-202ENST00000345734 TBL1YQ9BQ87 522 aa9.36□□□□□ -0.91
ATG4A-202ENST00000345734 NAT9Q9BTE0 207 aa9.36□□□□□ -0.91
ATG4A-202ENST00000345734 FICDQ9BVA6 458 aa9.36□□□□□ -0.91
ATG4A-202ENST00000345734 NT5MQ9NPB1 228 aa9.36□□□□□ -0.91
ATG4A-202ENST00000345734 CHRAC1Q9NRG0 131 aa9.36□□□□□ -0.91
ATG4A-202ENST00000345734 TRPM5Q9NZQ8 1165 aa9.36□□□□□ -0.91
ATG4A-202ENST00000345734 FAM8A1Q9UBU6 413 aa9.36□□□□□ -0.91
ATG4A-202ENST00000345734 AAR2Q9Y312 384 aaKnown RBP9.36□□□□□ -0.91
ATG4A-202ENST00000345734 FAM169AQ9Y6X4 670 aa9.36□□□□□ -0.91
ATG4A-202ENST00000345734 PLXNA4Q9HCM2 1894 aa9.36□□□□□ -0.91
ATG4A-202ENST00000345734 ZCWPW2A0A1B0GU75 182 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 F5H5T6 163 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 ATXN7O15265 892 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-202ENST00000345734 TEX28O15482 410 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 ACSL4O60488 711 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 KLKB1P03952 638 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 IRF1P10914 325 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 OR1E1P30953 314 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 CD151P48509 253 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 NPY2RP49146 381 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 LBX1P52954 281 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 MAXP61244 160 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 PTSQ03393 145 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 POLD3Q15054 466 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-202ENST00000345734 TAF12Q16514 161 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 ANKRD20A4Q4UJ75 823 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 NAPEPLDQ6IQ20 393 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 C6orf89Q6UWU4 347 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 PACS1Q6VY07 963 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 CDHR3Q6ZTQ4 885 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 DNAJB7Q7Z6W7 309 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-202ENST00000345734 TMEM135Q86UB9 458 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 LRRC49Q8IUZ0 686 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 ZNF276Q8N554 614 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 PDZD8Q8NEN9 1154 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 PABPC5Q96DU9 382 aaKnown RBP9.35□□□□□ -0.91
ATG4A-202ENST00000345734 CERS2Q96G23 380 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 APOPT1Q96IL0 206 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 MYRFLQ96LU7 910 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 CDK5RAP1Q96SZ6 601 aaKnown RBP9.35□□□□□ -0.91
ATG4A-202ENST00000345734 ATXN3LQ9H3M9 355 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 SP110Q9HB58 689 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 ALG13Q9NP73 1137 aaKnown RBP9.35□□□□□ -0.91
ATG4A-202ENST00000345734 CUEDC1Q9NWM3 386 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-202ENST00000345734 HSFX1Q9UBD0 423 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 DENND4CQ5VZ89 1909 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 PSMD3O43242 534 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 RAMP2O60895 175 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 EFCAB14O75071 495 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 KRT38O76015 456 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 ANXA9O76027 345 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 NEBLO76041 1014 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 USP1O94782 785 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 NMBRP28336 390 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 CA8P35219 290 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 ADRA1AP35348 466 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 ETFBP38117 255 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 HARS2P49590 506 aaKnown RBP9.35□□□□□ -0.91
ATG4A-202ENST00000345734 SGSHP51688 502 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 MGAT5Q09328 741 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 CDH17Q12864 832 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 DNAJC3Q13217 504 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 IHHQ14623 411 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 SEPT7Q16181 437 aaKnown RBP9.35□□□□□ -0.91
ATG4A-202ENST00000345734 ANO4Q32M45 955 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 LGSNQ5TDP6 509 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 NAIF1Q69YI7 327 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-202ENST00000345734 DENND5AQ6IQ26 1287 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 CGB2Q6NT52 195 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 FAM47EQ6ZV65 393 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 TMEM150AQ86TG1 271 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 NLRP8Q86W28 1048 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 GALNT12Q8IXK2 581 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 DNAJC5GQ8N7S2 189 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 CCDC197Q8NCU1 140 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 CDKL2Q92772 493 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 ZNF778Q96MU6 729 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 FAM111AQ96PZ2 611 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 AGAP2Q99490 1192 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 IL22Q9GZX6 179 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 NSRP1Q9H0G5 558 aaKnown RBP9.35□□□□□ -0.91
ATG4A-202ENST00000345734 ZNF334Q9HCZ1 680 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-202ENST00000345734 IL23AQ9NPF7 189 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 MRPL17Q9NRX2 175 aaKnown RBP9.35□□□□□ -0.91
ATG4A-202ENST00000345734 SOX13Q9UN79 622 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 INSL5Q9Y5Q6 135 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 ZFP37Q9Y6Q3 630 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-202ENST00000345734 CHD9Q3L8U1 2897 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 ALPK3Q96L96 1907 aa9.35□□□□□ -0.91
ATG4A-202ENST00000345734 A0A0D9SEW6 157 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 FAM237BA0A1B0GVD1 139 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 GOLGA8TH3BQL2 631 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 COPEO14579 308 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 TM9SF1O15321 606 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 SNX3O60493 162 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 GFRA3O60609 400 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 GJB3O75712 270 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 STC2O76061 302 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms