RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 CLDN6P56747 220 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 CLDN2P57739 230 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 DNAJC3Q13217 504 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 PIGHQ14442 188 aaPredicted RBP14.62□□□□□ -0.07
HMGN3-202ENST00000344726 STAT4Q14765 748 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 SLC45A4Q5BKX6 768 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 GDPD4Q6W3E5 623 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 TMPRSS7Q7RTY8 843 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 PKD1L2Q7Z442 2459 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 POLNQ7Z5Q5 900 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 SLC22A18ASQ8N1D0 253 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 EID2Q8N6I1 236 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 OR13H1Q8NG92 308 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 HSPH1Q92598 858 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 SKA1Q96BD8 255 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 NCAPGQ9BPX3 1015 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 ERVMER34-1Q9H9K5 563 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 FTSJ1Q9UET6 329 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 ARHGAP42A6NI28 874 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 SDC3O75056 442 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 PIGNO95427 931 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 ITGAVP06756 1048 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 THEGLP0DJG4 465 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 ITIH2P19823 946 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 HNRNPA2B1P22626 353 aaKnown RBP14.61□□□□□ -0.07
HMGN3-202ENST00000344726 AMPD1P23109 780 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 RPS21P63220 83 aaKnown RBP14.61□□□□□ -0.07
HMGN3-202ENST00000344726 TRIM14Q14142 442 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 SLC18A3Q16572 532 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 BOLA3Q53S33 107 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 KIAA1161Q6NSJ0 714 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 OR8K1Q8NGG5 319 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 CSPG4P5Q96PW8 444 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 CHP1Q99653 195 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 OSBPL1AQ9BXW6 950 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 SLC17A9Q9BYT1 436 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 PCDH18Q9HCL0 1135 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.61□□□□□ -0.07
HMGN3-202ENST00000344726 DONSONQ9NYP3 566 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 IP6K2Q9UHH9 426 aa14.61□□□□□ -0.07
HMGN3-202ENST00000344726 RALYQ9UKM9 306 aaKnown RBP14.61□□□□□ -0.07
HMGN3-202ENST00000344726 FAM149AA5PLN7 773 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 TMEM8BA6NDV4 472 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 IGLON5A6NGN9 336 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 SRRM3A6NNA2 597 aaPredicted RBP14.6□□□□□ -0.07
HMGN3-202ENST00000344726 H3BRJ5 948 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 DFFAO00273 331 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 AREL1O15033 823 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 BUB1BO60566 1050 aaPredicted RBP14.6□□□□□ -0.07
HMGN3-202ENST00000344726 PAK4O96013 591 aaPredicted RBP14.6□□□□□ -0.07
HMGN3-202ENST00000344726 TIMP2P16035 220 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 ARRB1P49407 418 aaPredicted RBP14.6□□□□□ -0.07
HMGN3-202ENST00000344726 ZNF135P52742 658 aaPredicted RBP14.6□□□□□ -0.07
HMGN3-202ENST00000344726 ADKP55263 362 aaKnown RBP14.6□□□□□ -0.07
HMGN3-202ENST00000344726 OVGP1Q12889 678 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 CCDC157Q569K6 752 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 TPRG1LQ5T0D9 272 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 DHRS13Q6UX07 377 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 ABI3BPQ7Z7G0 1075 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 TSEN2Q8NCE0 465 aaKnown RBP14.6□□□□□ -0.07
HMGN3-202ENST00000344726 ZNF564Q8TBZ8 553 aaPredicted RBP14.6□□□□□ -0.07
HMGN3-202ENST00000344726 TEKT4Q8WW24 435 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 TSC1Q92574 1164 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 RAB7BQ96AH8 199 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 KLHDC7BQ96G42 594 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 FEM1CQ96JP0 617 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 CNDP2Q96KP4 475 aaKnown RBP14.6□□□□□ -0.07
HMGN3-202ENST00000344726 BMFQ96LC9 184 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 NSMCE3Q96MG7 304 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 KLF6Q99612 283 aaPredicted RBP14.6□□□□□ -0.07
HMGN3-202ENST00000344726 C1QTNF2Q9BXJ5 285 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 CPEB1Q9BZB8 566 aaKnown RBP14.6□□□□□ -0.07
HMGN3-202ENST00000344726 GPR27Q9NS67 375 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 ABHD10Q9NUJ1 306 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 UCKL1Q9NWZ5 548 aa14.6□□□□□ -0.07
HMGN3-202ENST00000344726 MYLKQ15746 1914 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 SSU72P8A0A1W2PR75 194 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 POM121BA6NF01 834 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 MYO1FO00160 1098 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 ENC1O14682 589 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 MUSKO15146 869 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 YKT6O15498 198 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 TSPAN6O43657 245 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 MFAP3LO75121 409 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 CD48P09326 243 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 GIMD1P0DJR0 217 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 IL4RP24394 825 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 AKT2P31751 481 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 ACADVLP49748 655 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 RAD51Q06609 339 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 MMRN1Q13201 1228 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 SMAD1Q15797 465 aaKnown RBP14.59□□□□□ -0.07
HMGN3-202ENST00000344726 INAVAQ3KP66 663 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 ATP13A4Q4VNC1 1196 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 ZSWIM9Q86XI8 627 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 SLC25A45Q8N413 288 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 CTTNBP2NLQ9P2B4 639 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 DKK3Q9UBP4 350 aa14.59□□□□□ -0.07
HMGN3-202ENST00000344726 IPO11Q9UI26 975 aaKnown RBP14.59□□□□□ -0.07
HMGN3-202ENST00000344726 TSPAN11A1L157 253 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms