RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 ZACNQ401N2 412 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 C5orf22Q49AR2 442 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 CUZD1Q86UP6 607 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 NKAPQ8N5F7 415 aaKnown RBP18.21■□□□□ 0.51
SMC4-201ENST00000344722 PPP3R2Q96LZ3 170 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 MFSD14AQ96MC6 490 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 ZNF512Q96ME7 567 aaPredicted RBP18.21■□□□□ 0.51
SMC4-201ENST00000344722 RBM4BQ9BQ04 359 aaKnown RBP18.21■□□□□ 0.51
SMC4-201ENST00000344722 RBM4Q9BWF3 364 aaKnown RBP18.21■□□□□ 0.51
SMC4-201ENST00000344722 RIC1Q4ADV7 1423 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 THRBP10828 461 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 FEN1P39748 380 aaKnown RBP18.21■□□□□ 0.51
SMC4-201ENST00000344722 TRIM32Q13049 653 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 PRKD1Q15139 912 aaPredicted RBP18.21■□□□□ 0.51
SMC4-201ENST00000344722 EMC10Q5UCC4 262 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 SLCO2A1Q92959 643 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 SERAC1Q96JX3 654 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 SEPT5Q99719 369 aaPredicted RBP18.21■□□□□ 0.51
SMC4-201ENST00000344722 ZNF112Q9UJU3 913 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 PADI4Q9UM07 663 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 TRAF6Q9Y4K3 522 aa18.21■□□□□ 0.51
SMC4-201ENST00000344722 MEGF6O75095 1541 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 PPP2R1BP30154 601 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 EIF3MQ7L2H7 374 aaKnown RBP18.2■□□□□ 0.5
SMC4-201ENST00000344722 RBM12BQ8IXT5 1001 aaKnown RBP18.2■□□□□ 0.5
SMC4-201ENST00000344722 ZFP42Q96MM3 310 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 SH3BP4Q9P0V3 963 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 CAPGP40121 348 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 SEPHS1P49903 392 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 VWA5B1Q5TIE3 1220 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 CAMKK1Q8N5S9 505 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 OSBPL10Q9BXB5 764 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 KLHL1Q9NR64 748 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 ARHGAP28Q9P2N2 729 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 CRYL1Q9Y2S2 319 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 SNCAIPQ9Y6H5 919 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 BCLAF3A2AJT9 711 aaKnown RBP18.2■□□□□ 0.5
SMC4-201ENST00000344722 SERPINA1P01009 418 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 ZBED5Q49AG3 693 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 BICRALQ6AI39 1079 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 PDSS2Q86YH6 399 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 CCDC189A1A4V9 331 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 E7ENX8 843 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 ACKR2O00590 384 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 FADS2O95864 444 aaKnown RBP18.2■□□□□ 0.5
SMC4-201ENST00000344722 PAICSP22234 425 aaKnown RBP18.2■□□□□ 0.5
SMC4-201ENST00000344722 FBXW4P57775 412 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 REP15Q6BDI9 236 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 GCNT7Q6ZNI0 430 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 UXS1Q8NBZ7 420 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 RASSF5Q8WWW0 418 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 HSD17B14Q9BPX1 270 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 TMEM39BQ9GZU3 492 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 POPDC2Q9HBU9 364 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 TMED5Q9Y3A6 229 aa18.2■□□□□ 0.5
SMC4-201ENST00000344722 CLTCQ00610 1675 aaKnown RBP18.2■□□□□ 0.5
SMC4-201ENST00000344722 KCNU1A8MYU2 1149 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 MEIS2O14770 477 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 RGS10O43665 173 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 TAL1P17542 331 aaPredicted RBP18.19■□□□□ 0.5
SMC4-201ENST00000344722 ACLYP53396 1101 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 USP39Q53GS9 565 aaKnown RBP18.19■□□□□ 0.5
SMC4-201ENST00000344722 P2RY8Q86VZ1 359 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 CATSPERZQ9NTU4 200 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 OPTCQ9UBM4 332 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 SSR3Q9UNL2 185 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 DYRK1BQ9Y463 629 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 POLR2EP19388 210 aaKnown RBP18.19■□□□□ 0.5
SMC4-201ENST00000344722 PARP8Q8N3A8 854 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 C1orf21Q9H246 121 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 PCDHB12Q9Y5F1 795 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 TSPOAP1O95153 1857 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 CCDC162PA2VCL2 907 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 LACTBL1A8MY62 500 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 SLC22A3O75751 556 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 ZNF7P17097 686 aaPredicted RBP18.19■□□□□ 0.5
SMC4-201ENST00000344722 FMO4P31512 558 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 CDKN2BP42772 138 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 IL2P60568 153 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 INTS11Q5TA45 600 aaKnown RBP18.19■□□□□ 0.5
SMC4-201ENST00000344722 MON1BQ7L1V2 547 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 ATXN3LQ9H3M9 355 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 RHOJQ9H4E5 214 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 SYNPO2Q9UMS6 1093 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 COPZ1P61923 177 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 SMIM5Q71RC9 77 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 SPATA19Q7Z5L4 167 aa18.19■□□□□ 0.5
SMC4-201ENST00000344722 H7C0S8 307 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 PLIN3O60664 434 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 PENKP01210 267 aaPredicted RBP18.18■□□□□ 0.5
SMC4-201ENST00000344722 C2P06681 752 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 NFKB1P19838 968 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 POLD2P49005 469 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 TGFB2P61812 414 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 MGAT5BQ3V5L5 792 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 MIEF1Q9NQG6 463 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 PPM1HQ9ULR3 514 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 BTRCQ9Y297 605 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 TFECO14948 347 aaPredicted RBP18.18■□□□□ 0.5
SMC4-201ENST00000344722 NOS2P35228 1153 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms