RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 PRUNE2Q8WUY3 3088 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 MAGEB16A2A368 324 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 SPAG6O75602 509 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 GSRP00390 522 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 SRPRAP08240 638 aaKnown RBP16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 GSTA2P09210 222 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 PGAM1P18669 254 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 HLA-DPA1P20036 260 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 PHBP35232 272 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 MAPK8P45983 427 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 SNRPD1P62314 119 aaKnown RBP16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 KDSRQ06136 332 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 ZNF844Q08AG5 666 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 MSLNQ13421 630 aaPredicted RBP16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 PTPRNQ16849 979 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 AAK1Q2M2I8 961 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 SIRPB2Q5JXA9 342 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 STEAP4Q687X5 459 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 NAIF1Q69YI7 327 aaPredicted RBP16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 UNC5AQ6ZN44 842 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 TERB1Q8NA31 727 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 NXPE3Q969Y0 559 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 CFAP36Q96G28 342 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 MYO19Q96H55 970 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 RUFY1Q96T51 708 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 TRIM56Q9BRZ2 755 aaKnown RBP16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 EVLQ9UI08 416 aaPredicted RBP16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 PCDHGC4Q9Y5F7 938 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 RAI2Q9Y5P3 530 aa16.5■□□□□ 0.23
CEACAM1-202ENST00000344391 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 TIMM44O43615 452 aa16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 NDST3O95803 873 aa16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 PRLP01236 227 aa16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 NNMTP40261 264 aa16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 IFFO1Q0D2I5 559 aa16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 TRAF2Q12933 501 aa16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 EIF4HQ15056 248 aaKnown RBP16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 ACCSLQ4AC99 568 aa16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 PLCD3Q8N3E9 789 aa16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 TMEM109Q9BVC6 243 aa16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 SAMD15Q9P1V8 674 aa16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 SOX13Q9UN79 622 aa16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 CHKBQ9Y259 395 aa16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 MYO10Q9HD67 2058 aa16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 MUC22E2RYF6 1773 aaPredicted RBP16.49■□□□□ 0.23
CEACAM1-202ENST00000344391 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 FGF1P05230 155 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 STAT4Q14765 748 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 SMAD2Q15796 467 aaKnown RBP16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 LEXMQ3ZCV2 418 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 CARD16Q5EG05 197 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 PCID2Q5JVF3 399 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 HABP4Q5JVS0 413 aaKnown RBP16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 CEP85LQ5SZL2 805 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 TMEM135Q86UB9 458 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 PLPP6Q8IY26 295 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 OR6K2Q8NGY2 324 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 CSGALNACT1Q8TDX6 532 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 FBF1Q8TES7 1133 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 FRS2Q8WU20 508 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 VOPP1Q96AW1 172 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 SH3GL2Q99962 352 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 KIFC1Q9BW19 673 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 KCNK12Q9HB15 430 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 HECAQ9UBI9 543 aaPredicted RBP16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 LIMD1Q9UGP4 676 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 RABGEF1Q9UJ41 708 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 COL4A2P08572 1712 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 FAM237BA0A1B0GVD1 139 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 TCRBV9S1A1TA0A576 114 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 TTC34A8MYJ7 566 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 FZD6O60353 706 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 TCEA3O75764 348 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 KAT7O95251 611 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 POLBP06746 335 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 PDHA1P08559 390 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 CA4P22748 312 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 GALNT3Q14435 633 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 POU6F1Q14863 301 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 MYLK3Q32MK0 819 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 PREPLQ4J6C6 727 aaPredicted RBP16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 ARMC3Q5W041 872 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 KDM1BQ8NB78 822 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 GSDMBQ8TAX9 411 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 CCDC77Q9BR77 488 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 ROPN1BQ9BZX4 212 aaPredicted RBP16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 ACSS3Q9H6R3 686 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 ROPN1Q9HAT0 212 aaPredicted RBP16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 CHRAC1Q9NRG0 131 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 FAM53CQ9NYF3 392 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 PLA2G4CQ9UP65 541 aa16.48■□□□□ 0.23
CEACAM1-202ENST00000344391 TBC1D3BA6NDS4 549 aa16.47■□□□□ 0.23
CEACAM1-202ENST00000344391 OPA1O60313 960 aa16.47■□□□□ 0.23
CEACAM1-202ENST00000344391 USP1O94782 785 aa16.47■□□□□ 0.23
CEACAM1-202ENST00000344391 ALDH1A2O94788 518 aa16.47■□□□□ 0.23
CEACAM1-202ENST00000344391 SYF2O95926 243 aaKnown RBP16.47■□□□□ 0.23
CEACAM1-202ENST00000344391 C1QAP02745 245 aa16.47■□□□□ 0.23
CEACAM1-202ENST00000344391 ALADP13716 330 aa16.47■□□□□ 0.23
CEACAM1-202ENST00000344391 ADRA1DP25100 572 aa16.47■□□□□ 0.23
CEACAM1-202ENST00000344391 GKP32189 559 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms