RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 MFSD1Q9H3U5 465 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 DIDO1Q9BTC0 2240 aaKnown RBP17.75■□□□□ 0.43
SMAD4-201ENST00000342988 REREQ9P2R6 1566 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 RIIAD1A6NNX1 92 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 OGTO15294 1046 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 TSPAN5P62079 268 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 SCGB2A2Q13296 93 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 SNAPC2Q13487 334 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 MAPK14Q16539 360 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 MAPKAPK3Q16644 382 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 NAT14Q8WUY8 206 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 PFDN5Q99471 154 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 MKNK1Q9BUB5 465 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 SLC4A5Q9BY07 1137 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 DCLK1O15075 740 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 DNAJB2P25686 324 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 POU6F1Q14863 301 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 ZNF772Q68DY9 489 aaPredicted RBP17.75■□□□□ 0.43
SMAD4-201ENST00000342988 PTAR1Q7Z6K3 402 aaPredicted RBP17.75■□□□□ 0.43
SMAD4-201ENST00000342988 A0A1B0GTH6 734 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 CBX4O00257 560 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 TFRCP02786 760 aaKnown RBP17.75■□□□□ 0.43
SMAD4-201ENST00000342988 CCR1P32246 355 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 RPA3P35244 121 aaPredicted RBP17.75■□□□□ 0.43
SMAD4-201ENST00000342988 CUL2Q13617 745 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 OMDQ99983 421 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 CELF4Q9BZC1 486 aaKnown RBP17.75■□□□□ 0.43
SMAD4-201ENST00000342988 MARC1Q5VT66 337 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 METTL21CQ5VZV1 264 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 RAD51AP1Q96B01 352 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 UXTQ9UBK9 157 aaPredicted RBP17.75■□□□□ 0.43
SMAD4-201ENST00000342988 RFX7Q2KHR2 1363 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 FTH1P02794 183 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 PGAM1P18669 254 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 NAGLUP54802 743 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 DNAJC14Q6Y2X3 702 aaPredicted RBP17.75■□□□□ 0.43
SMAD4-201ENST00000342988 TUBGCP5Q96RT8 1024 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 ACAT1P24752 427 aaKnown RBP17.75■□□□□ 0.43
SMAD4-201ENST00000342988 GRAPQ13588 217 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 RASAL3Q86YV0 1011 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 KATNAL2Q8IYT4 538 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 GRAPLQ8TC17 118 aaPredicted RBP17.75■□□□□ 0.43
SMAD4-201ENST00000342988 SYT15Q9BQS2 421 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 TBCCD1Q9NVR7 557 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 PIM2Q9P1W9 311 aa17.75■□□□□ 0.43
SMAD4-201ENST00000342988 SAMHD1Q9Y3Z3 626 aaKnown RBP17.75■□□□□ 0.43
SMAD4-201ENST00000342988 MRASO14807 208 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 ROR2Q01974 943 aaKnown RBP17.74■□□□□ 0.43
SMAD4-201ENST00000342988 MPPE1Q53F39 396 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 EFCAB12Q6NXP0 572 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 SLITRK4Q8IW52 837 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 PDPRQ8NCN5 879 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 FOXN3O00409 490 aaPredicted RBP17.74■□□□□ 0.43
SMAD4-201ENST00000342988 HBP1O60381 514 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 MFSD10Q14728 455 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 ZNF280BQ86YH2 543 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 FMR1NBQ8N0W7 255 aaPredicted RBP17.74■□□□□ 0.43
SMAD4-201ENST00000342988 APOPT1Q96IL0 206 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 SETD4Q9NVD3 440 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 TRHDEQ9UKU6 1024 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 FARSAQ9Y285 508 aaKnown RBP17.74■□□□□ 0.43
SMAD4-201ENST00000342988 KDM4BO94953 1096 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 CDK9P50750 372 aaKnown RBP17.74■□□□□ 0.43
SMAD4-201ENST00000342988 ANXA8L1Q5VT79 327 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 PRAMEF17Q5VTA0 474 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 C1orf216Q8TAB5 229 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 HM13Q8TCT9 377 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 ABI3Q9P2A4 366 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 PHF24Q9UPV7 400 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 TEX13CA0A0J9YWL9 993 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 CDYL2Q8N8U2 506 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 ANKS1AQ92625 1134 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 SPG21Q9NZD8 308 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 C5orf51A6NDU8 294 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 HLA-DRAP01903 254 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 ZNF730Q6ZMV8 503 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 FCRL4Q96PJ5 515 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 VPS45Q9NRW7 570 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 KCNK4Q9NYG8 393 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 GGA2Q9UJY4 613 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 TLX3O43711 291 aaPredicted RBP17.74■□□□□ 0.43
SMAD4-201ENST00000342988 PAPSS2O95340 614 aaPredicted RBP17.74■□□□□ 0.43
SMAD4-201ENST00000342988 CRY2Q49AN0 593 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 XRRA1Q6P2D8 792 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 SDR16C5Q8N3Y7 309 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 OR2W6PQ8NHA6 318 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 DNAJB14Q8TBM8 379 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 CLIP3Q96DZ5 547 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 GORASP1Q9BQQ3 440 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 ZNF135P52742 658 aaPredicted RBP17.74■□□□□ 0.43
SMAD4-201ENST00000342988 SLC47A1Q96FL8 570 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 DNAJC28Q9NX36 388 aa17.74■□□□□ 0.43
SMAD4-201ENST00000342988 ZNF335Q9H4Z2 1342 aaPredicted RBP17.73■□□□□ 0.43
SMAD4-201ENST00000342988 VIRMAQ69YN4 1812 aaKnown RBP17.73■□□□□ 0.43
SMAD4-201ENST00000342988 PRAMEF33A0A0G2JMD5 474 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 NPHP3-ACAD11A0A0J9YXS1 232 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 TEX33O43247 280 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 PRAMEF10O60809 474 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 CST1P01037 141 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 CYP2R1Q6VVX0 501 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms